CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31415	Soybean	cytosol, plastid	95.74	95.01
CDX98102	Canola	cytosol, plastid	66.54	74.3
Bra025178.1-P	Field mustard	cytosol, plastid	70.6	73.0
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	70.99	71.26
Solyc05g014340.2.1	Tomato	cytosol	69.05	71.12
CDX83578	Canola	cytosol	66.15	70.95
AT1G13460.2	Thale cress	cytosol, plastid	67.5	70.94
PGSC0003DMT400045008	Potato	cytosol, plastid	68.86	70.92
Bra019720.1-P	Field mustard	plastid	67.5	70.79
CDY30030	Canola	plastid	67.89	70.77
Bra036352.1-P	Field mustard	cytosol, plastid	70.6	69.0
KRG94414	Soybean	plastid	69.44	68.64
Zm00001d043447_P001	Maize	cytosol	22.63	68.02
HORVU2Hr1G083850.1	Barley	cytosol	65.76	68.0
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	66.15	67.99
Os04t0485100-01	Rice	plasma membrane	66.54	67.58
EER93109	Sorghum	cytosol, plastid	67.7	67.44
TraesCS2D01G341400.3	Wheat	mitochondrion	65.57	67.4
TraesCS2A01G320700.2	Wheat	mitochondrion	65.57	67.4
HORVU5Hr1G120550.1	Barley	nucleus, plastid	66.15	66.93
TraesCS4A01G341600.1	Wheat	plastid	66.15	66.93
TraesCS5D01G531300.1	Wheat	plastid	66.34	66.86
TraesCS5B01G533000.1	Wheat	plastid	66.15	66.67
KXG26587	Sorghum	mitochondrion	65.57	66.47
CDY13605	Canola	cytosol, plastid	65.38	66.4
Os03t0844500-01	Rice	cytosol	66.15	66.15
KRH57624	Soybean	cytosol, mitochondrion	68.28	66.1
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	65.57	65.57
KRG94343	Soybean	cytosol, plastid	67.89	65.49
Os08t0122000-01	Rice	plasma membrane	65.18	65.31
TraesCS7D01G310200.1	Wheat	cytosol, plastid	65.18	65.18
AT3G26020.4	Thale cress	cytosol, plastid	66.54	65.03
TraesCS7B01G214300.2	Wheat	nucleus	64.99	64.99
KRG90768	Soybean	extracellular, mitochondrion	11.8	64.89
TraesCS7A01G313600.1	Wheat	nucleus	64.6	64.6
OQU79819	Sorghum	cytosol	65.96	64.46
KRG96039	Soybean	cytosol, plastid	57.25	63.38
Os07t0274800-02	Rice	extracellular, plasma membrane	63.25	63.25
KRH67758	Soybean	plastid	56.87	62.55
KRH14754	Soybean	cytosol, plastid	64.41	62.13
KRH73387	Soybean	cytosol, plastid	64.22	61.83
HORVU0Hr1G004960.2	Barley	cytosol	58.8	61.17
KRH19952	Soybean	cytosol	56.67	60.66
OQU88848	Sorghum	cytosol	58.99	60.52
KRH32554	Soybean	cytosol	56.87	60.49
KRH61853	Soybean	plastid	53.77	56.05
KRH52526	Soybean	cytosol	53.38	55.53
KRH35993	Soybean	cytosol	51.64	55.05
KRH16045	Soybean	cytosol, mitochondrion, plastid	52.22	54.88
KRH05059	Soybean	cytosol, mitochondrion, plastid	51.64	54.27
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	20.12	52.79
KRH03791	Soybean	cytosol	48.94	49.22
KRH56674	Soybean	cytosol	48.94	49.13
KRH36100	Soybean	plastid	32.11	36.32

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100797758	MapMan:18.4.24.1.2.3	EMBL:ACUP02010799	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_18G010400	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
UniProt:I1MYJ6	InterPro:IPR011989	EnsemblPlants:KRG97478	ProteinID:KRG97478	ProteinID:KRG97478.1	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI000233E2A0
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:739454..743773

Molecular Weight (calculated)

59071.5 Da

IEP (calculated)

8.697

GRAVY (calculated)

-0.350

Length

517 amino acids

Sequence
(BLAST)

001: MFKQIFSKLP RKSSKGSEHG GSGRTHHGVT TSSKSSESVS VTPGGTKPGN SSSAGPNHGN RVPLPLAVNE NNIHNNPNNG NFGSYEALPA FRDVPSSEKP
101: TLFIKKLRMC CVVFDFTDPA KHIKEKEIKR QTLVELLDYV TSANAKFVEN MMQEVVKMVS ANIFRTLSPQ PRENKIVDGV DVEDEEPSMD PAWPHLQIVY
201: ELFLRFVASP ELDAKLAKRY IDQSFILKLL DLFDSEDPRE REYLKMTLHR IYGKFMAHRP FIRKAINNVF FNFIFETEKH NGIAEFLEIL GSIINGFALP
301: LKEEHKLFLV RILIPLHKPK CLAMYHQQLS YCITQFVEKD CKLADTIIRG LLKYWPITNS PKEVMFLSEL EEVLEATQPP EFQRCMVPLF RRIARCLNSP
401: HFQVAERALF LWNNDHIMNL IKQNRKVIMP IIFPALERNA RSHWNQAVHG LTLNVRKIFN DVDADLSKEC LQKFEEEESK KSEVMAGREA TWKRLEELAA
501: NGEAVLIGKA PPRNSAG

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.