CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005501_P001	Maize	cytosol	93.25	87.36
Zm00001d019363_P001	Maize	cytosol	92.26	86.27
Os07t0274800-02	Rice	extracellular, plasma membrane	76.79	74.85
EER93109	Sorghum	cytosol, plastid	70.04	68.02
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	57.34	65.83
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	52.18	64.78
GSMUA_Achr8P32030_001	Banana	cytosol	61.51	64.45
PGSC0003DMT400052115	Potato	plastid	66.47	64.42
CDX98102	Canola	cytosol, plastid	59.13	64.36
Solyc02g067980.2.1	Tomato	nucleus	66.67	64.12
Solyc05g014340.2.1	Tomato	cytosol	63.69	63.94
Solyc02g093800.2.1	Tomato	plastid	66.27	63.86
KRG94414	Soybean	plastid	66.27	63.86
PGSC0003DMT400017950	Potato	plastid	65.87	63.36
PGSC0003DMT400045008	Potato	cytosol, plastid	63.1	63.35
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	64.09	62.72
Bra025178.1-P	Field mustard	cytosol, plastid	60.91	61.4
Bra019720.1-P	Field mustard	plastid	59.92	61.26
GSMUA_AchrUn_...	Banana	cytosol	31.94	60.98
CDY30030	Canola	plastid	59.92	60.89
KXG26587	Sorghum	mitochondrion	61.51	60.78
AT1G13460.2	Thale cress	cytosol, plastid	59.33	60.77
KRH57624	Soybean	cytosol, mitochondrion	64.09	60.49
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	58.53	60.45
KRG94343	Soybean	cytosol, plastid	63.89	60.07
OQU79819	Sorghum	cytosol	62.7	59.74
VIT_14s0219g00010.t01	Wine grape	cytosol	15.28	59.69
CDX83578	Canola	cytosol	56.94	59.54
KRH31415	Soybean	cytosol, plastid	61.51	59.5
KRG97478	Soybean	cytosol, plastid	60.52	58.99
Bra036352.1-P	Field mustard	cytosol, plastid	61.51	58.6
CDY13605	Canola	cytosol, plastid	56.55	55.99
AT3G26020.4	Thale cress	cytosol, plastid	57.34	54.63
KXG37844	Sorghum	plastid	52.78	50.76
PGSC0003DMT400034814	Potato	cytosol	21.03	50.24
EES03447	Sorghum	plastid	49.4	49.8
EES18643	Sorghum	plastid	49.01	49.3
EES19134	Sorghum	plastid	46.63	48.55
EES00199	Sorghum	cytosol, mitochondrion, plastid	45.63	45.73
CDY50168	Canola	cytosol	13.49	42.24
EER99281	Sorghum	mitochondrion	33.73	36.09

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:8084609	InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:C5X3J4
ProteinID:EER96216.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	EnsemblPlants:OQU88848	ProteinID:OQU88848	ProteinID:OQU88848.1	ProteinID:OQU88849.1	ProteinID:OQU88850.1
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF18	EnsemblPlantsGene:SORBI_3002G105200
SUPFAM:SSF48371	unigene:Sbi.2279	UniParc:UPI0001A83B02	RefSeq:XP_002459695.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:12465868..12471331

Molecular Weight (calculated)

58474.9 Da

IEP (calculated)

8.951

GRAVY (calculated)

-0.308

Length

504 amino acids

Sequence
(BLAST)

001: MMKQIFGRRK SKTADKEFTG GRTFNQLSGS GAANLSGQPP FLSGTGNTYG SGNRTGFQDS RINDTNFRPL PSFKDVPNAE KQNLLIKKLN MCCTLFDFMD
101: AAKNIKEKEI KTLMLLEIDE YVRTATVKFP EIVVEAITKM ISVNLFRTLI SPPREKKVLR AFDLEEDEPL MDPAWPHLYH VYELLLTFVQ SPENDAKLAK
201: RYIDNSFILR LLELFDSEDA RERDRLKTVL HRIYGKFMVY RPFIRKAINN IFYQFIYETE KHNGIAELLE IFGSIINGFA LPLKEEHKLF LVRTLIPLHK
301: PRCTTVYHRQ LSYCITQFVE KDCKLADTVI RGLIKYWPIT NSTKEVLFLG ELEEILDATQ PAEFQKCMVP LSHQIARCLN SSHFQVAERV LFFWNNSHFE
401: NFVKQNSKVI LPIIFPALEK NINGHWNQVV QSLSLNVRKI FSDRDPQLFT ECLRKYEEDK DREKEFKLKQ ELAWKRLDEI ASAKITSGEA VLVSPTLPRQ
501: PSVL

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.