CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83578	Canola	cytosol	89.98	95.02
Bra025178.1-P	Field mustard	cytosol, plastid	91.55	93.2
AT3G26020.4	Thale cress	cytosol, plastid	87.23	83.93
CDX98102	Canola	cytosol, plastid	71.91	79.05
CDY30030	Canola	plastid	73.67	75.6
Solyc05g014340.2.1	Tomato	cytosol	65.62	66.53
PGSC0003DMT400045008	Potato	cytosol, plastid	65.03	65.94
KRG97478	Soybean	cytosol, plastid	66.4	65.38
KRH31415	Soybean	cytosol, plastid	66.8	65.26
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	65.62	64.85
HORVU2Hr1G083850.1	Barley	cytosol	62.67	63.8
Os04t0485100-01	Rice	plasma membrane	63.46	63.46
TraesCS2A01G320700.2	Wheat	mitochondrion	62.08	62.82
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	62.08	62.82
TraesCS2D01G341400.3	Wheat	mitochondrion	62.08	62.82
KXG26587	Sorghum	mitochondrion	62.67	62.55
CDX90593	Canola	cytosol, plastid	56.97	62.5
CDY09766	Canola	mitochondrion, plastid	56.97	62.37
EER93109	Sorghum	cytosol, plastid	63.46	62.24
Os08t0122000-01	Rice	plasma membrane	62.87	62.02
TraesCS7B01G214300.2	Wheat	nucleus	62.67	61.7
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	62.67	61.7
TraesCS7D01G310200.1	Wheat	cytosol, plastid	62.48	61.51
Os03t0844500-01	Rice	cytosol	62.28	61.32
TraesCS7A01G313600.1	Wheat	nucleus	62.08	61.12
HORVU5Hr1G120550.1	Barley	nucleus, plastid	60.9	60.67
TraesCS4A01G341600.1	Wheat	plastid	60.71	60.47
TraesCS5D01G531300.1	Wheat	plastid	60.9	60.43
CDY22925	Canola	plastid	58.55	60.32
TraesCS5B01G533000.1	Wheat	plastid	60.71	60.23
OQU79819	Sorghum	cytosol	62.28	59.92
CDY48287	Canola	plastid	58.35	59.88
CDY44320	Canola	cytosol, plastid	59.33	59.45
CDY38628	Canola	cytosol, mitochondrion	59.14	59.14
CDX83579	Canola	cytosol	54.03	57.89
CDY13606	Canola	cytosol	53.83	57.81
Os07t0274800-02	Rice	extracellular, plasma membrane	58.55	57.64
CDY41574	Canola	cytosol	55.01	57.38
CDY54611	Canola	cytosol	54.62	56.73
OQU88848	Sorghum	cytosol	55.99	56.55
HORVU0Hr1G004960.2	Barley	cytosol	55.21	56.54
CDY07942	Canola	cytosol, plastid	54.03	56.01
CDX73997	Canola	cytosol, plastid	53.63	55.83
CDY04885	Canola	cytosol, plastid	51.28	54.15
CDX87083	Canola	cytosol	37.13	53.69
CDY44370	Canola	cytosol, plastid	50.49	53.21
CDY50168	Canola	cytosol	16.11	50.93
CDY05497	Canola	mitochondrion, plastid	48.53	50.93
CDX67616	Canola	cytosol	48.72	50.72
CDY54903	Canola	mitochondrion, plastid	48.33	50.62
CDY07514	Canola	cytosol	48.33	50.31
CDY56962	Canola	cytosol, plastid	47.74	49.39
CDX88186	Canola	cytosol, plastid	47.54	48.89
CDX80521	Canola	plastid	47.54	48.79
CDX73425	Canola	cytosol, plastid	48.33	45.81
CDY08231	Canola	mitochondrion	27.9	42.14
CDY04189	Canola	cytosol, golgi, nucleus	17.88	40.09
CDY67412	Canola	mitochondrion	24.56	38.58
CDY35507	Canola	golgi	21.02	35.31
CDY40986	Canola	nucleus, plastid	54.22	28.93
CDX99733	Canola	nucleus, plastid	54.81	27.57

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078FGQ5	UniProt:A0A078FGQ5	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY13605	ProteinID:CDY13605	ProteinID:CDY13605.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00078017001	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI0004EF13E6
SEG:seg	:	:	:	:	:

Description

BnaA06g33180DBnaA06g33180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGQ5]

Coordinates

chrLK032037:+:215168..217931

Molecular Weight (calculated)

59037.7 Da

IEP (calculated)

9.202

GRAVY (calculated)

-0.480

Length

509 amino acids

Sequence
(BLAST)

001: MWKQILSKLP KKSSKNDHHH HRGREHGGGH SSSSSHASTS KSTDNGHGKS ANSHTKNAPS GGRSAGNTNT NTNGGVFTPY EALPSFKDVP NTEKQNLFIK
101: KLNLCRVVFD FTDPTKNIKE KDIKRQTLLE LVDYVNSANG KFSEVSIQEV VRMVSANIFR TLNPQPRENK VIDALDLEEE EPSMDLAWPH LQLVYELFLR
201: FVASPDTDTK LAKRYVDQSF VLRLLDLFDS EDPRERDCLK TILHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH
301: KFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA RCLNSLHFQT WLFWVSVRVF RQEARESIYY MTHFQFGYVI
401: YIINISSSVA ERALFLWNNN HIENLIMQSR KVILPIIFPA LERNAQKHWN QAVHSLTLNV RKIFSDLDPE LFKECLAKFK EDESKEGETK AKREATWRRL
501: EEVGMRKAS

Best Arabidopsis Sequence Match ( AT3G26020.4 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKFVEKDCKL ADTVIRGLLK YWPVTNSSKE VMFLNELEEV LEATQPPEFQ RCMVPLFRQI ARCLNSLHFQ AISFRHTLTA LLMRSRYSLP
401: VISNEQMEEL ILRYGKYQCL GLLYSALGVA ERALFLWNNN HIENLIMQNR KVILPIIFPA LERNAQKHWN QAVHSLTLNV RKIFHDLDPE LFKECLAKFK
501: EDESKAAETE AKREATWKRL EELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.