CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22925	Canola	plastid	97.38	97.77
AT4G15415.5	Thale cress	cytosol, plastid	91.33	86.78
CDX90593	Canola	cytosol, plastid	79.64	85.13
CDY09766	Canola	mitochondrion, plastid	79.64	84.95
CDY38628	Canola	cytosol, mitochondrion	79.64	77.6
CDY44320	Canola	cytosol, plastid	79.44	77.56
VIT_12s0059g01170.t01	Wine grape	mitochondrion, plastid	76.21	68.98
CDX98102	Canola	cytosol, plastid	62.9	67.39
KRH73387	Soybean	cytosol, plastid	71.77	66.29
KRH14754	Soybean	cytosol, plastid	71.17	65.86
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	71.37	64.95
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	60.69	64.59
CDY30030	Canola	plastid	63.1	63.1
CDX83578	Canola	cytosol	60.28	62.03
CDY41574	Canola	cytosol	59.88	60.86
CDY54611	Canola	cytosol	59.48	60.2
CDX87083	Canola	cytosol	42.54	59.94
CDX83579	Canola	cytosol	57.26	59.79
CDY13606	Canola	cytosol	57.06	59.7
CDX73997	Canola	cytosol, plastid	58.27	59.1
CDY07942	Canola	cytosol, plastid	57.86	58.45
CDY13605	Canola	cytosol, plastid	59.88	58.35
CDY04885	Canola	cytosol, plastid	54.84	56.43
CDY05497	Canola	mitochondrion, plastid	55.04	56.29
CDY54903	Canola	mitochondrion, plastid	54.84	55.97
CDY44370	Canola	cytosol, plastid	54.03	55.49
CDX88186	Canola	cytosol, plastid	53.43	53.54
CDY56962	Canola	cytosol, plastid	52.82	53.25
CDX80521	Canola	plastid	53.23	53.23
CDX67616	Canola	cytosol	51.61	52.35
CDY07514	Canola	cytosol	51.21	51.94
CDX73425	Canola	cytosol, plastid	53.23	49.16
CDY08231	Canola	mitochondrion	33.06	48.66
CDY67412	Canola	mitochondrion	29.44	45.06
CDY35507	Canola	golgi	25.81	42.24
CDY50168	Canola	cytosol	13.51	41.61
CDY04189	Canola	cytosol, golgi, nucleus	18.35	40.09
CDY40986	Canola	nucleus, plastid	58.06	30.19
CDX99733	Canola	nucleus, plastid	58.27	28.56

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078IE18	UniProt:A0A078IE18	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY48287	ProteinID:CDY48287	ProteinID:CDY48287.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00089165001	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF27	SUPFAM:SSF48371	UniParc:UPI0004EECCA7
SEG:seg	:	:	:	:	:

Description

BnaC01g31410DBnaC01g31410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IE18]

Coordinates

chrLK032764:-:26401..28685

Molecular Weight (calculated)

56640.4 Da

IEP (calculated)

8.219

GRAVY (calculated)

-0.197

Length

496 amino acids

Sequence
(BLAST)

001: MKQIFGKLPK KTSKSSNPNV EGHHVPPSSK PSNSNAPNGT IAPSSNRATN GVFEALPSFR DVPTSEKPNL FIKKLTLCCV VFDFTDPSKN LREKEIKRQT
101: LLELVDYIST VSTKFTDAAM QEIAKLAVVN LFREFPSANQ ESKILETLDG DDEEPALEPA WPHLQVVYEL LLRFVASSMT DAKLAKRYID HSFVLKLLDL
201: FDSEDQRERE YLKTILHRIY GKFMVHRPFI RKAINNIFYR FMFETEKHNG IAELLEILGS IINGFALPLK EEHKLFLVRA LIPLHRPKCA AAYHQQLCYC
301: IVQFVEKDFK LADTVIRGLL KYWPVTNSSK EVMFLGELEE VLEATQAAEF QRCMVPLFRR IARCINSSHF QVAERALFLW NNDHIRNLIT QNYKVIMPIV
401: FPAMERNTRG HWHQAVQSLT LNVRKVLAET DQALFDECLA KFQEDEVNTT EVVVKREATW KLLEDLAASK TVSNEAVLLS RFSSSVTLAT GKTSAS

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.