Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029801.1-P | Field mustard | cytosol, plastid | 98.78 | 99.59 |
| CDY41574 | Canola | cytosol | 97.55 | 97.95 |
| CDX73997 | Canola | cytosol, plastid | 91.84 | 92.02 |
| CDY07942 | Canola | cytosol, plastid | 91.43 | 91.24 |
| AT3G09880.1 | Thale cress | cytosol, plastid | 92.04 | 90.38 |
| KRH67758 | Soybean | plastid | 77.14 | 80.43 |
| KRG96039 | Soybean | cytosol, plastid | 76.12 | 79.87 |
| CDY04885 | Canola | cytosol, plastid | 76.53 | 77.8 |
| KRH19952 | Soybean | cytosol | 76.33 | 77.43 |
| KRH32554 | Soybean | cytosol | 76.33 | 76.95 |
| CDY44370 | Canola | cytosol, plastid | 75.51 | 76.6 |
| Solyc10g083920.1.1 | Tomato | nucleus | 75.1 | 74.8 |
| PGSC0003DMT400072691 | Potato | cytosol, mitochondrion | 74.49 | 74.19 |
| VIT_08s0007g04850.t01 | Wine grape | cytosol | 75.71 | 73.9 |
| Solyc09g008400.2.1 | Tomato | nucleus | 73.88 | 73.43 |
| CDX98102 | Canola | cytosol, plastid | 60.0 | 63.5 |
| CDY56962 | Canola | cytosol, plastid | 62.24 | 61.99 |
| CDX67616 | Canola | cytosol | 61.84 | 61.96 |
| CDY07514 | Canola | cytosol | 61.63 | 61.76 |
| CDY08231 | Canola | mitochondrion | 42.04 | 61.13 |
| CDY22925 | Canola | plastid | 60.2 | 59.72 |
| CDY09766 | Canola | mitochondrion, plastid | 56.53 | 59.57 |
| CDY48287 | Canola | plastid | 60.2 | 59.48 |
| CDY30030 | Canola | plastid | 60.2 | 59.48 |
| CDX90593 | Canola | cytosol, plastid | 56.12 | 59.27 |
| CDY38628 | Canola | cytosol, mitochondrion | 61.43 | 59.14 |
| CDY44320 | Canola | cytosol, plastid | 61.02 | 58.86 |
| CDX83578 | Canola | cytosol | 56.94 | 57.88 |
| CDY67412 | Canola | mitochondrion | 37.96 | 57.41 |
| CDX87083 | Canola | cytosol | 41.22 | 57.39 |
| CDY13606 | Canola | cytosol | 55.51 | 57.38 |
| CDX83579 | Canola | cytosol | 55.31 | 57.05 |
| CDX73425 | Canola | cytosol, plastid | 62.45 | 56.98 |
| CDY35507 | Canola | golgi | 34.29 | 55.45 |
| CDY13605 | Canola | cytosol, plastid | 56.73 | 54.62 |
| CDY05497 | Canola | mitochondrion, plastid | 52.04 | 52.58 |
| CDY54903 | Canola | mitochondrion, plastid | 52.04 | 52.47 |
| CDX80521 | Canola | plastid | 51.22 | 50.6 |
| CDX88186 | Canola | cytosol, plastid | 51.02 | 50.51 |
| CDY50168 | Canola | cytosol | 13.88 | 42.24 |
| CDY04189 | Canola | cytosol, golgi, nucleus | 17.35 | 37.44 |
| CDY40986 | Canola | nucleus, plastid | 55.92 | 28.72 |
| CDX99733 | Canola | nucleus, plastid | 55.92 | 27.08 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:18.4.24.1.2.3 | GO:A0A078IX46 | UniProt:A0A078IX46 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlants:CDY54611 | ProteinID:CDY54611 | ProteinID:CDY54611.1 | ncoils:Coil | GO:GO:0000159 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008601 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0019888 | GO:GO:0030234 | GO:GO:0043666 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00014349001 | InterPro:IPR011989 |
| PFAM:PF01603 | PIRSF:PIRSF028043 | InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF46 | SUPFAM:SSF48371 |
| UniParc:UPI0004EDD906 | SEG:seg | : | : | : | : |
Description
BnaA05g28660DBnaA05g28660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IX46]
Coordinates
chrLK033334:+:41482..44250
Molecular Weight (calculated)
56669.5 Da
IEP (calculated)
6.829
GRAVY (calculated)
-0.323
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKKIMKGGH KKPSKSESNE PSSYNLGGSN VVVSHASRGA LAPPSQVTTA TPPPPITSVT PLPLFRDVPV SERQSLFLRK LQNCCFHFDF TDTTKIVREK
101: EIKRQTLLEL VDFIQSGASK IISESCQEEM IKMVSLNLFR CLPPASHENT GQEPADPEEE EPYLEPSWPH LQLVYELLLR YVVSTDTDTK VAKRYIDHSF
201: VLKLLDLFDS EDPREREYLK TILHRIYGKF MVHRPFIRKA INNIFYRFIY ETERHGGIGE LLEILGSIIN GFALPMKEEH KLFLIRVLIP LHKPKPIAIY
301: HQQLSYCIVQ FVEKDYKLAD TVIRGLLKYW PVTNCTKENL FLQELEEVLE ATQPVEFQRC MVPLFQQIAR CLNSSHFQVA ERALFLWNNE HIVGLIAQNR
401: SVILPIIYPA LEKNIQSHWN QAVHGLTVNI KKMFMEMDPD LFEECQRQYE EKQAKSKEVE EQRQFTWKRL AEAAAERDGV GGGEDYMITS
101: EIKRQTLLEL VDFIQSGASK IISESCQEEM IKMVSLNLFR CLPPASHENT GQEPADPEEE EPYLEPSWPH LQLVYELLLR YVVSTDTDTK VAKRYIDHSF
201: VLKLLDLFDS EDPREREYLK TILHRIYGKF MVHRPFIRKA INNIFYRFIY ETERHGGIGE LLEILGSIIN GFALPMKEEH KLFLIRVLIP LHKPKPIAIY
301: HQQLSYCIVQ FVEKDYKLAD TVIRGLLKYW PVTNCTKENL FLQELEEVLE ATQPVEFQRC MVPLFQQIAR CLNSSHFQVA ERALFLWNNE HIVGLIAQNR
401: SVILPIIYPA LEKNIQSHWN QAVHGLTVNI KKMFMEMDPD LFEECQRQYE EKQAKSKEVE EQRQFTWKRL AEAAAERDGV GGGEDYMITS
001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS
Arabidopsis Description
B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.