Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67412 | Canola | mitochondrion | 96.7 | 90.43 |
| CDY08231 | Canola | mitochondrion | 88.12 | 79.23 |
| CDY44370 | Canola | cytosol, plastid | 60.07 | 37.68 |
| CDY04885 | Canola | cytosol, plastid | 59.74 | 37.55 |
| CDY54611 | Canola | cytosol | 55.45 | 34.29 |
| CDY41574 | Canola | cytosol | 55.12 | 34.22 |
| CDY07942 | Canola | cytosol, plastid | 55.45 | 34.22 |
| CDX73997 | Canola | cytosol, plastid | 54.79 | 33.95 |
| AT5G03470.1 | Thale cress | cytosol | 55.45 | 33.94 |
| KRH67758 | Soybean | plastid | 51.49 | 33.19 |
| KRG96039 | Soybean | cytosol, plastid | 49.84 | 32.33 |
| CDX87083 | Canola | cytosol | 37.29 | 32.1 |
| KRH19952 | Soybean | cytosol | 49.84 | 31.26 |
| KRH32554 | Soybean | cytosol | 49.84 | 31.07 |
| Solyc09g008400.2.1 | Tomato | nucleus | 49.51 | 30.43 |
| VIT_08s0007g04850.t01 | Wine grape | cytosol | 49.51 | 29.88 |
| Solyc10g083920.1.1 | Tomato | nucleus | 48.51 | 29.88 |
| PGSC0003DMT400072691 | Potato | cytosol, mitochondrion | 48.18 | 29.67 |
| CDX98102 | Canola | cytosol, plastid | 42.9 | 28.08 |
| CDY56962 | Canola | cytosol, plastid | 44.22 | 27.24 |
| CDX67616 | Canola | cytosol | 43.23 | 26.79 |
| CDY07514 | Canola | cytosol | 43.23 | 26.79 |
| CDY30030 | Canola | plastid | 42.9 | 26.21 |
| CDY22925 | Canola | plastid | 42.57 | 26.11 |
| CDY48287 | Canola | plastid | 42.24 | 25.81 |
| CDY13606 | Canola | cytosol | 39.27 | 25.11 |
| CDX83579 | Canola | cytosol | 39.27 | 25.05 |
| CDX73425 | Canola | cytosol, plastid | 44.22 | 24.95 |
| CDY38628 | Canola | cytosol, mitochondrion | 41.91 | 24.95 |
| CDY44320 | Canola | cytosol, plastid | 41.58 | 24.8 |
| CDY05497 | Canola | mitochondrion, plastid | 38.61 | 24.12 |
| CDX90593 | Canola | cytosol, plastid | 36.3 | 23.71 |
| CDY54903 | Canola | mitochondrion, plastid | 37.95 | 23.66 |
| CDY09766 | Canola | mitochondrion, plastid | 35.97 | 23.44 |
| CDX80521 | Canola | plastid | 37.62 | 22.98 |
| CDX88186 | Canola | cytosol, plastid | 36.63 | 22.42 |
| CDX83578 | Canola | cytosol | 35.31 | 22.2 |
| CDY13605 | Canola | cytosol, plastid | 35.31 | 21.02 |
| CDY04189 | Canola | cytosol, golgi, nucleus | 11.88 | 15.86 |
| CDY40986 | Canola | nucleus, plastid | 39.27 | 12.47 |
| CDX99733 | Canola | nucleus, plastid | 39.93 | 11.96 |
| CDY50168 | Canola | cytosol | 4.95 | 9.32 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | GO:A0A078HCK0 | UniProt:A0A078HCK0 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlants:CDY35507 | ProteinID:CDY35507 | ProteinID:CDY35507.1 | ncoils:Coil | GO:GO:0000159 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008601 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0019888 | GO:GO:0030234 | GO:GO:0043666 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00058544001 | InterPro:IPR011989 |
| PFAM:PF01603 | InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF45 | SUPFAM:SSF48371 | UniParc:UPI0004EDE14F |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g24050DBnaA01g24050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCK0]
Coordinates
chrLK032353:+:231762..234255
Molecular Weight (calculated)
35401.5 Da
IEP (calculated)
7.342
GRAVY (calculated)
-0.444
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHKPFIRKG INNIFYSIIN VFALPMKEEH NLFLIRVLIP LHKPKPIGVY HQQLTYCVVQ FVEKDYRLAD TVIRGLLKFW PVTNCTKEVL FLGELEEVLE
101: ATQPVAERSL LWNSEHIVVL IAQNRSVILP IIFASLEKNT ESHWNQAVHG LSENIKRMFM EMDPELFEEC QQEYEEKQAR LKEVEEQRQN DHFALFKTKF
201: FNSFDQKYYH YKIYPQQPPQ QLAVNTAPPA TSISTQETSA SGVTNILYKL SKAELRSYQL TRIEEPEEDI DPDYLHYLRA IGAYDSVQPQ SARGKGRGRK
301: GRR
101: ATQPVAERSL LWNSEHIVVL IAQNRSVILP IIFASLEKNT ESHWNQAVHG LSENIKRMFM EMDPELFEEC QQEYEEKQAR LKEVEEQRQN DHFALFKTKF
201: FNSFDQKYYH YKIYPQQPPQ QLAVNTAPPA TSISTQETSA SGVTNILYKL SKAELRSYQL TRIEEPEEDI DPDYLHYLRA IGAYDSVQPQ SARGKGRGRK
301: GRR
001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS
Arabidopsis Description
B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.