CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67758	Soybean	plastid	97.64	97.02
KRH32554	Soybean	cytosol	84.58	81.28
KRH19952	Soybean	cytosol	83.94	81.16
CDY54611	Canola	cytosol	79.87	76.12
Bra029801.1-P	Field mustard	cytosol, plastid	79.02	75.93
CDY41574	Canola	cytosol	79.23	75.82
CDX73997	Canola	cytosol, plastid	79.23	75.66
Bra001296.1-P	Field mustard	cytosol, plastid	79.02	75.46
CDY07942	Canola	cytosol, plastid	78.59	74.75
AT3G09880.1	Thale cress	cytosol, plastid	79.44	74.35
Solyc10g083920.1.1	Tomato	nucleus	77.73	73.78
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	77.3	73.37
VIT_08s0007g04850.t01	Wine grape	cytosol	78.8	73.31
Solyc09g008400.2.1	Tomato	nucleus	76.87	72.82
AT5G03470.1	Thale cress	cytosol	76.87	72.53
CDY04885	Canola	cytosol, plastid	71.09	68.88
CDY44370	Canola	cytosol, plastid	70.24	67.91
Bra028832.1-P	Field mustard	cytosol, plastid	70.02	67.84
KRG90768	Soybean	extracellular, mitochondrion	12.85	63.83
KRH35993	Soybean	cytosol	64.45	62.06
KRG97478	Soybean	cytosol, plastid	63.38	57.25
KRH31415	Soybean	cytosol, plastid	63.6	57.01
KRG94414	Soybean	plastid	63.38	56.6
CDY08231	Canola	mitochondrion	40.69	56.38
KRH57624	Soybean	cytosol, mitochondrion	63.38	55.43
KRH14754	Soybean	cytosol, plastid	63.6	55.41
KRH73387	Soybean	cytosol, plastid	63.6	55.31
KRH52526	Soybean	cytosol	58.24	54.73
KRG94343	Soybean	cytosol, plastid	62.53	54.48
KRH61853	Soybean	plastid	57.82	54.44
Bra031075.1-P	Field mustard	mitochondrion	36.4	53.8
KRH05059	Soybean	cytosol, mitochondrion, plastid	56.53	53.66
KRH16045	Soybean	cytosol, mitochondrion, plastid	56.32	53.46
CDY67412	Canola	mitochondrion	36.62	52.78
KRH03791	Soybean	cytosol	55.03	50.0
KRH56674	Soybean	cytosol	55.03	49.9
CDY35507	Canola	golgi	32.33	49.84
KRH36100	Soybean	plastid	38.12	38.95

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100798842	MapMan:18.4.24.1.2.3	EMBL:ACUP02012143	InterPro:ARM-like	InterPro:ARM-type_fold
ncoils:Coil	EnsemblPlantsGene:GLYMA_19G185700	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666
GO:GO:0050790	UniProt:I1NAC5	InterPro:IPR011989	EnsemblPlants:KRG96039	ProteinID:KRG96039	ProteinID:KRG96039.1
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371
UniParc:UPI000233E00C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:44425668..44431517

Molecular Weight (calculated)

53838.3 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.241

Length

467 amino acids

Sequence
(BLAST)

001: MFKRIMKGGQ KKPSKTDPSD PSPFAPAAAA APALVVPQPS GTIEPLPLFR DVAVSERQNL FIRKLHICCH VLDFSDTLKS VREKEIKRQT LMELVDFIQS
101: GSGKITETCQ EEMIKMVSAN IFRCLPPASH ENTGQEATDP EEEEPCLEPA WPHLQLVYEL LLRYVVSSDT DTKVAKRYID HSFVLKLLDL FDSEDPRERE
201: YLKTILHRVY GKFMVHRPFI RKAINNIFFR FIYETERHSG IGELLEILGS IINGFALPMK EEHKLFLARA LLPLHKPKPV GVYHQQLSYC IAQFVEKDYK
301: LSDTVIRGLL KYWPVTNCQK EVLFLGELEE VLEATQTAEF QRCMVPLFRQ VARCLNSSHF QVAERALFLW NNEHIVSLIA QNRTVVLPII FEALEKNIKS
401: HWNQAVHGLT VNVRKMFVEM DAELFEECQR QFEEREAKAK ELEVQRELNW KRLAEAASQN GVDMVTA

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.