Factsheet for Bra001296.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73997	Canola	cytosol, plastid	99.18	99.18
CDY07942	Canola	cytosol, plastid	97.14	96.74
Bra029801.1-P	Field mustard	cytosol, plastid	90.8	91.36
AT3G09880.1	Thale cress	cytosol, plastid	92.64	90.78
KRH67758	Soybean	plastid	76.07	79.15
KRG96039	Soybean	cytosol, plastid	75.46	79.02
KRH19952	Soybean	cytosol	76.89	77.85
KRH32554	Soybean	cytosol	76.69	77.16
Bra028832.1-P	Field mustard	cytosol, plastid	75.05	76.14
Solyc10g083920.1.1	Tomato	nucleus	74.44	73.98
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	73.82	73.37
VIT_08s0007g04850.t01	Wine grape	cytosol	75.26	73.31
Solyc09g008400.2.1	Tomato	nucleus	73.01	72.41
Bra003201.1-P	Field mustard	golgi	49.49	63.52
Bra007117.1-P	Field mustard	cytosol, plastid	61.76	61.38
Bra025178.1-P	Field mustard	cytosol, plastid	60.94	59.6
Bra019720.1-P	Field mustard	plastid	59.92	59.43
Bra012790.1-P	Field mustard	mitochondrion, plastid	59.1	59.1
Bra031294.1-P	Field mustard	cytosol, plastid	61.15	58.74
Bra039553.1-P	Field mustard	plastid	59.1	58.5
Bra031075.1-P	Field mustard	mitochondrion	37.63	58.23
Bra025179.1-P	Field mustard	cytosol	55.21	56.96
Bra036351.1-P	Field mustard	cytosol	55.83	56.88
Bra036352.1-P	Field mustard	cytosol, plastid	61.35	56.71
Bra020504.1-P	Field mustard	mitochondrion, plastid	51.53	51.75
Bra009846.1-P	Field mustard	plastid	51.12	50.51
Bra017338.1-P	Field mustard	cytosol	23.72	37.78

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra001296	EnsemblPlants:Bra001296.1
EnsemblPlants:Bra001296.1-P	ncoils:Coil	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666
GO:GO:0050790	InterPro:IPR011989	UniProt:M4CAR7	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI000254054E	SEG:seg	:

Description

AT3G09880 (E=1e-235) ATB' BETA | ATB' BETA; protein phosphatase type 2A regulator

Coordinates

chrA03:+:15731383..15732942

Molecular Weight (calculated)

56564.6 Da

IEP (calculated)

7.116

GRAVY (calculated)

-0.325

Length

489 amino acids

Sequence
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PPTTYGPGSN VVVSHASRGA LVQSPLTAST PQPPPMTSVE PLPLFRDVPV SERQALFLRK LQNCCFLFDF TDTVKNAREK
101: EIKRQTLLEL VDFVQSGASK IISESCQEEM VKMVSLNIFR CLPPGSHENT GQEPADPEEE EPYLEPSWPH LQLVYELLLR YVVSTDTDTK VAKRYIHHSF
201: VLKLLDLFDS EDPREREYLK TILHRIYGKF MVHRPFIRKA INNIFYRFIY ETERHSGIGE LLEILGSIIN GFALPMKEEH KLFLIRVLIP LHKPKPIAIY
301: HQQLSYCIVQ FVEKDYKLAD TVIRGLLKYW PVTNCTKENL FLTELEEVLE ATQPVEFQRC MVPLFQQIGR SLNSSHFQVA ERALFLWNNE HIVGLIAQNR
401: TVILPIIYPA LEKNIQSHWN QAVHGLTTNI KKMFMEMDLE LFEECQRQYE EKQAKSKEVE EQRLLSWKRL AEAAAKRDGV GGEDHMITS

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.