Factsheet for Bra012790.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90593	Canola	cytosol, plastid	94.07	99.14
Bra039553.1-P	Field mustard	plastid	84.87	84.01
AT4G15415.5	Thale cress	cytosol, plastid	86.09	80.65
Bra031294.1-P	Field mustard	cytosol, plastid	77.71	74.66
VIT_12s0059g01170.t01	Wine grape	mitochondrion, plastid	73.82	65.88
KRH73387	Soybean	cytosol, plastid	70.35	64.06
KRH14754	Soybean	cytosol, plastid	69.94	63.81
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	70.76	63.49
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	60.33	63.3
Bra019720.1-P	Field mustard	plastid	63.19	62.68
Bra025178.1-P	Field mustard	cytosol, plastid	63.8	62.4
Bra029801.1-P	Field mustard	cytosol, plastid	59.51	59.88
Bra036352.1-P	Field mustard	cytosol, plastid	64.01	59.17
Bra036351.1-P	Field mustard	cytosol	58.08	59.17
Bra001296.1-P	Field mustard	cytosol, plastid	59.1	59.1
Bra025179.1-P	Field mustard	cytosol	56.85	58.65
Bra028832.1-P	Field mustard	cytosol, plastid	54.81	55.6
Bra020504.1-P	Field mustard	mitochondrion, plastid	54.6	54.83
Bra003201.1-P	Field mustard	golgi	42.54	54.59
Bra009846.1-P	Field mustard	plastid	53.78	53.13
Bra007117.1-P	Field mustard	cytosol, plastid	51.74	51.42
Bra031075.1-P	Field mustard	mitochondrion	29.45	45.57
Bra017338.1-P	Field mustard	cytosol	26.99	43.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra012790	EnsemblPlants:Bra012790.1
EnsemblPlants:Bra012790.1-P	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	UniProt:M4D8I0	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF27	SUPFAM:SSF48371	UniParc:UPI00025407D3	:	:	:

Description

AT4G15415 (E=2e-229) ATB' GAMMA | ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator

Coordinates

chrA03:+:22248092..22249634

Molecular Weight (calculated)

55787.6 Da

IEP (calculated)

8.465

GRAVY (calculated)

-0.193

Length

489 amino acids

Sequence
(BLAST)

001: MIKQIFGKLP KKTSKSSSHP NGEGGVNPYH TPPPTSNRPN GVYEPLPSFR DVPASEKPTL FIKKLTMCCV LFDFTDPSKN LREKETKRQT LLDLVDYIAT
101: VPTKFTDAAM QEISKLAAIN LFRTFPTAAN HESKVLETLD GNDDEELALE PAWPHLQLVY ELLLRFVASS MTDAKLAKRY VDHSFVLKLL ELFDSVDQRE
201: REYLKTILHR IYGKFMVHRP FIRKAINNIF YRFVFETERH NGIAELLEIL GSIINGFALP LKEEHKLFLV RALMPLHRPK CAAAYHQQLC YCIVQFVEKD
301: SKLADTVVRG LLRYWPVTNS SKEVMFLGEL EEVLEGTQAA EFQRCMVPLF RRIARCLNSS HFQVAERALF LWNNDHIRNL ITQNLKVIMP IVFPAMERNM
401: CSHWNQTVKN LTLNVRKVLA ETDQALFDEC LAKFQEDEAS KAEVAAKREA TWKLLEDLAA SKTVSSEAVL VTRFTSSVTI TTSGKASGS

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.