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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY22925 Canola plastid 86.97 91.9
Bra039553.1-P Field mustard plastid 86.59 91.5
CDY48287 Canola plastid 86.78 91.33
CDY09766 Canola mitochondrion, plastid 76.82 86.24
Bra012790.1-P Field mustard mitochondrion, plastid 80.65 86.09
CDX90593 Canola cytosol, plastid 76.25 85.78
AT3G21650.2 Thale cress nucleus, plastid 84.29 80.59
VIT_12s0059g01170.t01 Wine grape mitochondrion, plastid 77.01 73.36
KRH73387 Soybean cytosol, plastid 71.26 69.27
KRH14754 Soybean cytosol, plastid 70.5 68.66
PGSC0003DMT400001856 Potato cytosol, mitochondrion, plastid 70.5 67.52
GSMUA_Achr9P19120_001 Banana mitochondrion, plastid 59.58 66.74
AT1G13460.2 Thale cress cytosol, plastid 61.69 65.45
AT3G09880.1 Thale cress cytosol, plastid 59.39 62.12
AT3G26030.1 Thale cress cytosol 55.36 60.59
AT3G26020.4 Thale cress cytosol, plastid 59.58 58.79
AT5G03470.1 Thale cress cytosol 54.98 57.98
AT5G25510.1 Thale cress cytosol, mitochondrion, plastid 54.02 56.4
AT3G54930.2 Thale cress cytosol, plastid 51.15 53.72
Protein Annotations
Gene3D:1.25.10.10MapMan:18.4.24.1.2.3EntrezGene:827211UniProt:A0A178V2I7ProteinID:AEE83598.1ProteinID:AEE83599.1
EMBL:AK229298ProteinID:ANM66523.1ProteinID:ANM66524.1InterPro:ARM-likeInterPro:ARM-type_foldArrayExpress:AT4G15415
EnsemblPlantsGene:AT4G15415RefSeq:AT4G15415TAIR:AT4G15415RefSeq:AT4G15415-TAIR-GEnsemblPlants:AT4G15415.5Symbol:ATB' GAMMA
EMBL:AY093761Unigene:At.4343EMBL:BT020581ProteinID:CAB10320.1ProteinID:CAB78583.1GO:GO:0000003
GO:GO:0000159GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0006139GO:GO:0006464GO:GO:0006555GO:GO:0006950GO:GO:0006952GO:GO:0007154
GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0008266GO:GO:0009058
GO:GO:0009653GO:GO:0009719GO:GO:0009742GO:GO:0009759GO:GO:0009791GO:GO:0009908
GO:GO:0009987GO:GO:0010090GO:GO:0016043GO:GO:0019538GO:GO:0019748GO:GO:0019888
GO:GO:0030154GO:GO:0030234GO:GO:0031348GO:GO:0033353GO:GO:0043666GO:GO:0050790
GO:GO:0090342GO:GO:2000377InterPro:IPR011989RefSeq:NP_001319948.1RefSeq:NP_001319949.1RefSeq:NP_567464.1
RefSeq:NP_849390.1ProteinID:OAO99262.1PFAM:PF01603PIRSF:PIRSF028043InterPro:PP2A_B56PANTHER:PTHR10257
PANTHER:PTHR10257:SF27UniProt:Q0WNY8UniProt:Q8RW96SUPFAM:SSF48371EMBL:U73528UniParc:UPI00000A3D51
SEG:seg:::::
Description
B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
Coordinates
chr4:+:8817032..8819783
Molecular Weight (calculated)
59160.1 Da
IEP (calculated)
8.084
GRAVY (calculated)
-0.232
Length
522 amino acids
Sequence
(BLAST)
001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.