Factsheet for AT3G54930.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56962	Canola	cytosol, plastid	90.54	91.46
Bra007117.1-P	Field mustard	cytosol, plastid	90.54	91.46
CDY07514	Canola	cytosol	89.13	90.59
CDX67616	Canola	cytosol	89.13	90.59
Bra003201.1-P	Field mustard	golgi	65.59	85.56
CDX73425	Canola	cytosol, plastid	90.14	83.43
GSMUA_Achr6P29780_001	Banana	mitochondrion	49.7	65.87
PGSC0003DMT400060086	Potato	cytosol, plastid	61.77	64.63
VIT_13s0019g04920.t01	Wine grape	plastid	58.55	64.38
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	56.54	62.58
AT3G09880.1	Thale cress	cytosol, plastid	61.97	61.72
GSMUA_Achr7P17010_001	Banana	mitochondrion	49.9	60.19
AT5G03470.1	Thale cress	cytosol	59.76	60.0
GSMUA_Achr7P07360_001	Banana	cytosol	49.9	59.76
TraesCS4B01G026300.1	Wheat	mitochondrion	59.36	57.17
TraesCS4D01G023700.1	Wheat	mitochondrion	59.15	56.98
KXG37844	Sorghum	plastid	59.96	56.87
KRH35993	Soybean	cytosol	54.93	56.29
Zm00001d013544_P002	Maize	cytosol, plastid	59.15	56.21
AT1G13460.2	Thale cress	cytosol, plastid	54.33	54.88
Os03t0681800-00	Rice	plasma membrane	58.95	54.77
Zm00001d033370_P001	Maize	plastid	60.56	54.43
AT4G15415.5	Thale cress	cytosol, plastid	53.72	51.15
AT3G26030.1	Thale cress	cytosol	48.09	50.1
AT3G21650.2	Thale cress	nucleus, plastid	53.52	48.72
AT3G26020.4	Thale cress	cytosol, plastid	50.5	47.45
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	46.88	46.6

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:824658	ProteinID:AEE79315.1	EMBL:AK175667	ProteinID:ANM64909.1
InterPro:ARM-like	InterPro:ARM-type_fold	ArrayExpress:AT3G54930	EnsemblPlantsGene:AT3G54930	RefSeq:AT3G54930	TAIR:AT3G54930
RefSeq:AT3G54930-TAIR-G	EnsemblPlants:AT3G54930.2	Unigene:At.35066	EMBL:BT010562	ProteinID:CAB41091.1	ProteinID:CAC16085.1
GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	RefSeq:NP_001326910.1	RefSeq:NP_191053.1	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	UniProt:Q9SV41	SUPFAM:SSF48371	UniParc:UPI00000A985F	SEG:seg

Description

B'EPSILONSerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9SV41]

Coordinates

chr3:-:20350839..20352964

Molecular Weight (calculated)

57548.1 Da

IEP (calculated)

6.238

GRAVY (calculated)

-0.357

Length

497 amino acids

Sequence
(BLAST)

001: MFNKIIKLGQ KKFNKSDQHH QDNNNNNNNT STNTVVRGSR TTTPAPSSVS NGESQTTAQS PSQTPNHPMF TTTPILEVLP LLKDVSSSDR PLLFMKKAHM
101: CSCHCDFSDT LIMPREKEIK RQTLLELVDF LHSSSGKVNE TMQSELIRMV SANIFRCLPP AYHENTGAPP EGNDPEEEEP YLEPWWPHLQ LVYELLLRYV
201: VSSEIEPKTA KKFINHTFVS RLLDLFDSED PREREYLKTV LHRIYGKFIF HRPFIRCSIY NIFYKFLYET ERCIGIGELL EILGSVINGF TVPMREEHRL
301: YLVKAILPLH KSKGISIYHQ QLAYCVTQFV EKDYKLADTV IRGLLKFWPL TNCQKEVLFL GELEEVLDAT EPSEFQQCVV PLFTQIGKCL NSAHFQVAER
401: ALFLWNNEHI VGLIAQNKDV IFPIIFEALE RNMKGHWNQA VHGLSENVRR MFLEMDTELF EECEKQYLEN EAKACELLEQ RELTWKRLEE AASLAAN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.