Factsheet for HORVU4Hr1G003930.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G023700.1	Wheat	mitochondrion	94.43	82.17
TraesCS4B01G026300.1	Wheat	mitochondrion	93.54	81.4
KXG37844	Sorghum	plastid	92.2	79.01
Zm00001d013544_P002	Maize	cytosol, plastid	91.09	78.2
Os03t0681800-00	Rice	plasma membrane	92.43	77.57
GSMUA_Achr6P29780_001	Banana	mitochondrion	63.03	75.47
Zm00001d033370_P001	Maize	plastid	92.43	75.05
GSMUA_Achr7P17010_001	Banana	mitochondrion	64.59	70.39
GSMUA_Achr7P07360_001	Banana	cytosol	64.14	69.4
VIT_13s0019g04920.t01	Wine grape	plastid	69.71	69.25
PGSC0003DMT400060086	Potato	cytosol, plastid	66.37	62.74
Bra003201.1-P	Field mustard	golgi	51.67	60.89
KRH35993	Soybean	cytosol	63.03	58.35
AT3G54930.2	Thale cress	cytosol, plastid	62.58	56.54
CDY07514	Canola	cytosol	61.02	56.03
CDX67616	Canola	cytosol	61.02	56.03
HORVU3Hr1G022550.2	Barley	cytosol	47.88	55.7
CDY56962	Canola	cytosol, plastid	60.8	55.49
Bra007117.1-P	Field mustard	cytosol, plastid	60.8	55.49
HORVU5Hr1G120550.1	Barley	nucleus, plastid	61.92	54.4
HORVU2Hr1G083850.1	Barley	cytosol	59.69	53.6
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	61.02	53.0
HORVU0Hr1G004960.2	Barley	cytosol	56.79	51.31
CDX73425	Canola	cytosol, plastid	61.02	51.02
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	52.34	48.35
HORVU1Hr1G084450.3	Barley	plastid	55.01	40.1
HORVU5Hr1G084630.1	Barley	cytosol	35.19	33.83

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	UniProt:A0A287MZ60	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil
GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	EnsemblPlantsGene:HORVU4Hr1G003930
EnsemblPlants:HORVU4Hr1G003930.1	InterPro:IPR011989	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI000B4876F1	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A287MZ60]

Coordinates

chrchr4H:+:8808440..8815115

Molecular Weight (calculated)

51017.6 Da

IEP (calculated)

6.036

GRAVY (calculated)

-0.128

Length

449 amino acids

Sequence
(BLAST)

001: SPAAAQPPLL EPLPLLRDVA AADRPGLLLR KLRLVAALFD FSDSLKHPRE KEAKRQALLE LVDYVQAPAA AAGSNNNAPA RLPDAVQEAL VAAISANIFR
101: PLPPALHESA ASIDPNATPD DEEEPYLDPA WPHLALVYEL LLRYVVSPDT DTKVAKRYVD HAFVLRLLDH FDTEDPRERE YLKTVLHRIY GKFMVHRPFI
201: RKAINNVFYR FIFETERHNG IGELLEILGS IINGFALPMK EEHKLFLGRA LIPLHKPKSV AIYHQQLSYC IVQFVEKDYK LADAVIRGLL KYWPVINCQK
301: EVLFLGELED VLEATQPAEF QQCMVPLFKQ IGRCLNSAHF QVAERALFLW NNDHIVSLIA QNRGVILPII FEALERNIQS HWNQAVNGLT ANVRKMFLDM
401: DSELFEECQQ QYIEKVAKAK ELEEQRESAW RQLEAVAAKA SGDDMVLVN

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.