Factsheet for HORVU1Hr1G084450.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G382900.2	Wheat	plastid	79.55	98.39
TraesCS1B01G408600.1	Wheat	plastid	79.38	97.8
TraesCS1D01G390600.1	Wheat	plastid	79.38	97.8
EES18643	Sorghum	plastid	66.88	82.24
Zm00001d038944_P003	Maize	plastid	66.72	82.04
Os05t0555100-01	Rice	plastid	56.01	76.84
Zm00001d009500_P002	Maize	plastid	59.25	73.0
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	56.17	71.78
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	44.32	69.47
GSMUA_AchrUn_...	Banana	cytosol	52.6	68.79
CDX87083	Canola	cytosol	39.12	68.47
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	54.55	67.2
CDY05497	Canola	mitochondrion, plastid	52.6	66.8
KRH52526	Soybean	cytosol	53.73	66.6
Bra020504.1-P	Field mustard	mitochondrion, plastid	52.44	66.32
VIT_04s0008g04270.t01	Wine grape	mitochondrion	52.92	66.26
KRH16045	Soybean	cytosol, mitochondrion, plastid	52.92	66.26
CDY54903	Canola	mitochondrion, plastid	52.27	66.26
KRH61853	Soybean	plastid	53.25	66.13
KRH05059	Soybean	cytosol, mitochondrion, plastid	52.6	65.85
CDX80521	Canola	plastid	51.95	64.52
Bra009846.1-P	Field mustard	plastid	51.62	64.24
CDX88186	Canola	cytosol, plastid	51.62	64.24
GSMUA_Achr8P26100_001	Banana	cytosol	50.0	64.17
HORVU3Hr1G022550.2	Barley	cytosol	39.45	62.95
Solyc06g065690.2.1	Tomato	cytosol, plastid	49.68	61.45
PGSC0003DMT400067211	Potato	cytosol, plastid	49.68	61.45
VIT_11s0016g04500.t01	Wine grape	cytosol	52.76	60.86
PGSC0003DMT400002753	Potato	plastid	49.19	59.88
Solyc12g006920.1.1	Tomato	plastid	49.19	59.88
KRH56674	Soybean	cytosol	48.38	57.86
KRH03791	Soybean	cytosol	48.21	57.78
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	45.29	57.41
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	40.1	55.01
HORVU2Hr1G083850.1	Barley	cytosol	43.67	53.8
HORVU5Hr1G120550.1	Barley	nucleus, plastid	43.83	52.84
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	41.88	49.9
HORVU0Hr1G004960.2	Barley	cytosol	37.99	47.08
HORVU5Hr1G084630.1	Barley	cytosol	26.95	35.55

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	UniProt:A0A287GJV4	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	EnsemblPlantsGene:HORVU1Hr1G084450	EnsemblPlants:HORVU1Hr1G084450.3	InterPro:IPR011989
PFAM:PF01603	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	UniParc:UPI000B46E29F
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:533930790..533933893

Molecular Weight (calculated)

68025.4 Da

IEP (calculated)

9.332

GRAVY (calculated)

-0.134

Length

616 amino acids

Sequence
(BLAST)

001: FPSCLLPPTS LPLLSSSREE AADHAQAHRF RSASPSIAPS RAPGRARRRV SAHGSGDPRP RRPQIRCRSV LVGGGAAICF CCRLLRACEA LLRSPAAVPC
101: RRRREGLLGG RAGATKMWKQ FLSKLPRTKS SGGGGGGDSG QCSGGNGNPI QRTSSVPAGG GGRSASTIKR MSSAVFPSSV VAGIEPLVSF KDVPSSERHN
201: LFVSKLGLCC AVFDFSDPAK SSAEKDIKRQ TLLDLIDFVD SSSGRYPEAV IAACSRMLAV NLFRVFPPSY RSGGGSSGGG GGGEGDEDEP MFDPAWCHLQ
301: LVYELLLKFI GSNSLDAKIG KKYFDHSFIV RLLNLLDSED PRERDSLKTI LHRIYGKFMV HRPFIRKAVS NIFYHFVFET QRHNGIAELL EVFGSVISGF
401: ALPLKEEHKI FLWRVLIPLH KPKSVGVYLQ QLTYCVTQFL EKDPKLAGSI IIGLLRYWPV TNSQKEVMFL SEIEEILEAT SMVEFQKCMV PLFRRIAHCI
501: NSSHFQVAER ALFMWNNDHI ISLVAQNRQV IMPIIVPALE QNGQNHWNHA VLNLTANVMK MFSEMDEELF SVCLTKCKED EENQVSMEEK RRLKWAKLES
601: AAALQPVTGH TAVLVG

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.