Factsheet for TraesCS1B01G408600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G382900.2	Wheat	plastid	98.4	98.8
TraesCS1D01G390600.1	Wheat	plastid	98.4	98.4
EES18643	Sorghum	plastid	82.0	81.84
Zm00001d038944_P003	Maize	plastid	81.8	81.64
HORVU1Hr1G084450.3	Barley	plastid	97.8	79.38
Os05t0555100-01	Rice	plastid	66.6	74.16
Zm00001d009500_P002	Maize	plastid	72.4	72.4
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	69.2	71.78
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	54.4	69.21
GSMUA_AchrUn_...	Banana	cytosol	64.8	68.79
CDX87083	Canola	cytosol	48.2	68.47
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	67.2	67.2
CDY05497	Canola	mitochondrion, plastid	64.8	66.8
KRH52526	Soybean	cytosol	66.4	66.8
VIT_04s0008g04270.t01	Wine grape	mitochondrion	65.6	66.67
KRH61853	Soybean	plastid	65.8	66.33
Bra020504.1-P	Field mustard	mitochondrion, plastid	64.6	66.32
KRH16045	Soybean	cytosol, mitochondrion, plastid	65.2	66.26
CDY54903	Canola	mitochondrion, plastid	64.4	66.26
KRH05059	Soybean	cytosol, mitochondrion, plastid	64.8	65.85
CDX80521	Canola	plastid	63.8	64.31
Bra009846.1-P	Field mustard	plastid	63.4	64.04
CDX88186	Canola	cytosol, plastid	63.4	64.04
GSMUA_Achr8P26100_001	Banana	cytosol	61.4	63.96
Solyc06g065690.2.1	Tomato	cytosol, plastid	61.4	61.65
PGSC0003DMT400067211	Potato	cytosol, plastid	61.4	61.65
VIT_11s0016g04500.t01	Wine grape	cytosol	64.4	60.3
Solyc12g006920.1.1	Tomato	plastid	60.6	59.88
PGSC0003DMT400002753	Potato	plastid	60.6	59.88
TraesCS3B01G140800.1	Wheat	plastid	56.4	58.02
KRH56674	Soybean	cytosol	59.6	57.86
KRH03791	Soybean	cytosol	59.4	57.78
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	55.8	57.41
TraesCS1B01G398300.1	Wheat	cytosol	11.8	55.14
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	53.6	53.28
TraesCS5B01G533000.1	Wheat	plastid	54.4	53.02
TraesCS4B01G026300.1	Wheat	mitochondrion	52.6	50.97
TraesCS7B01G214300.2	Wheat	nucleus	52.2	50.48
TraesCS5B01G335800.1	Wheat	cytosol	33.0	35.03

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0019888	GO:GO:0030234	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	EnsemblPlantsGene:TraesCS1B01G408600
EnsemblPlants:TraesCS1B01G408600.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:636262266..636264341

Molecular Weight (calculated)

55625.2 Da

IEP (calculated)

7.950

GRAVY (calculated)

-0.086

Length

500 amino acids

Sequence
(BLAST)

001: MWKQFLSKLP RTKSTGGGGG GDSGQCSGGG NGNPIQRTSS VPAGGGGGGR SASTIKRMSS AVFPSSVVAG IEPLVAFKDV PSSERHNLFV SKLGLCCAVF
101: DFSDPAKSSA EKDIKRQTLL DLIDFVDSSS GRYPEAVIAA CSRMLAVNLF RVFPPSYRSG AGSSSGGEGD EDEPMFDPAW CHLQLVYELL LKFIGSNSLD
201: AKIGKKYFDH SFIVRLLNLL DSEDPRERDS LKTILHRIYG KFMVHRPFIR KAVSNIFYHF VFETQRHNGI AELLEVFGSV ISGFALPLKE EHKIFLWRVL
301: IPLHKPKSVG VYLQQLTYCV TQFLEKDPKL AGSIIIGLLR YWPVTNSQKE VMFLSEIEEI LEATSMVEFQ KCMVPLFRRI AQCINSSHFQ VAERALFMWN
401: NDHIISLVAQ NRQVIMPIIV PALEQNGQNH WNHAVLNLTA NVMKMFSEMD EELFSACLTK CKEDEENQAS LEEKRRLKWA KLESAAALQP VTGHTAVLVG

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.