Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G394900.1 | Wheat | cytosol | 94.39 | 94.39 |
| TraesCS5B01G533000.1 | Wheat | plastid | 69.16 | 14.43 |
| Zm00001d049469_P001 | Maize | mitochondrion | 24.3 | 14.29 |
| TraesCS2B01G362000.2 | Wheat | cytosol, mitochondrion | 65.42 | 13.92 |
| TraesCS7B01G214300.2 | Wheat | nucleus | 66.36 | 13.73 |
| TraesCS4B01G026300.1 | Wheat | mitochondrion | 59.81 | 12.4 |
| TraesCS3B01G140800.1 | Wheat | plastid | 56.07 | 12.35 |
| TraesCS1B01G138000.1 | Wheat | cytosol, mitochondrion | 54.21 | 11.93 |
| TraesCS1B01G408600.1 | Wheat | plastid | 55.14 | 11.8 |
| TraesCS5B01G335800.1 | Wheat | cytosol | 35.51 | 8.07 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0000159 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019888 | GO:GO:0030234 | InterPro:IPR011989 | PFAM:PF01603 |
| InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF46 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS1B01G398300 | EnsemblPlants:TraesCS1B01G398300.1 |
Description
No Description!
Coordinates
chr1B:-:629471780..629472262
Molecular Weight (calculated)
12447.0 Da
IEP (calculated)
6.068
GRAVY (calculated)
-0.227
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHQQLSYCI TQFVEKDCKL AYTVIKGLLK YWPIRNSTKE VMCLGELEEI LEATQPAEFQ KCTVPLFLQI AGCLNNSHFQ DCLGYQAENC SWHGCQSWLL
101: HWSKPEP
101: HWSKPEP
001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS
Arabidopsis Description
Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.