Factsheet for Os03t0681800-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	77.57	92.43
TraesCS4D01G023700.1	Wheat	mitochondrion	85.23	88.37
TraesCS4B01G026300.1	Wheat	mitochondrion	84.86	87.98
KXG37844	Sorghum	plastid	85.79	87.6
Zm00001d013544_P002	Maize	cytosol, plastid	85.61	87.57
Zm00001d033370_P001	Maize	plastid	86.92	84.09
GSMUA_Achr7P17010_001	Banana	mitochondrion	59.63	77.43
GSMUA_Achr7P07360_001	Banana	cytosol	60.0	77.35
GSMUA_Achr6P29780_001	Banana	mitochondrion	53.64	76.53
VIT_13s0019g04920.t01	Wine grape	plastid	60.19	71.24
PGSC0003DMT400060086	Potato	cytosol, plastid	60.19	67.79
KRH35993	Soybean	cytosol	56.26	62.06
Bra003201.1-P	Field mustard	golgi	44.11	61.94
AT3G54930.2	Thale cress	cytosol, plastid	54.77	58.95
CDY07514	Canola	cytosol	53.46	58.49
CDX67616	Canola	cytosol	53.46	58.49
CDY56962	Canola	cytosol, plastid	53.46	58.13
Bra007117.1-P	Field mustard	cytosol, plastid	53.46	58.13
Os03t0844500-01	Rice	cytosol	55.33	57.25
Os08t0122000-01	Rice	plasma membrane	54.95	56.98
Os04t0485100-01	Rice	plasma membrane	53.27	55.99
Os07t0274800-02	Rice	extracellular, plasma membrane	53.64	55.51
Os01t0178400-01	Rice	cytosol	21.12	55.12
CDX73425	Canola	cytosol, plastid	53.64	53.45
Os05t0178400-01	Rice	plasma membrane	47.85	52.14
Os05t0555100-01	Rice	plastid	37.01	44.1
Os09t0542700-00	Rice	cytosol	30.65	34.02

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:4333730	ProteinID:AAP68376.1	ProteinID:ABF98219.1	ProteinID:ABF98220.1
ProteinID:ABF98221.1	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:BAS85767.1	ncoils:Coil	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	InterPro:IPR011989	EnsemblPlantsGene:Os03g0681800
EnsemblPlants:Os03t0681800-00	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF45
UniProt:Q7Y011	SUPFAM:SSF48371	UniParc:UPI00001A96DA	RefSeq:XP_015632616.1	RefSeq:XP_015632617.1	SEG:seg

Description

Protein phosphatase 2A, regulatory B subunit, B56 domain containing protein. (Os03t0681800-00)

Coordinates

chr3:-:27125016..27130733

Molecular Weight (calculated)

59552.4 Da

IEP (calculated)

7.210

GRAVY (calculated)

-0.224

Length

535 amino acids

Sequence
(BLAST)

001: MFNKIIKRGG RKGQRAADGG DAAHGRPAAA APSSSSGGAQ PPVTVNHASR AAAPSSPPSP HAAAAASAPS AGAAASNQAS SHHHQQQQPA AAPQPPLLEP
101: LPLLRDVAAA DRPGLLVRKL RLVAALFDFT DSLKHPREKE AKRQALLELV DYVQAPSPAA NANAPARLPE NVQEALVAAI SVNVFRPLPP ALHESAAAID
201: PGAAPDDEEE PYLDPAWPHL QLVYELLLRY VVSPDTDTKV AKRYVDHAFV LRLLDLFDSE DPREREYLKT VLHRIYGKFM VHRPFIRKAI NNVFYRFIFE
301: TERHNGIGEL LEILGSIING FALPMKEEHK LFLSRALIPL HKPKSVAIYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VINCQKEVLF LGELEEVLEA
401: TQPAEFQRCM VPLFKQIGRC LNSSHFQVAE RALFLWNNDH IVSLIAQNRS VIFPIIFEAL ERNITSHWNQ AVHGLTANVR KMFLDMDSEL FEECQQQYIE
501: KQARAKDMEE QRLSAWRQLE AAAAKASGDD MVLVN

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.