CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
nucleus 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73387	Soybean	cytosol, plastid	96.64	96.46
VIT_12s0059g01170.t01	Wine grape	mitochondrion, plastid	78.92	77.19
CDY44320	Canola	cytosol, plastid	68.1	71.85
CDY38628	Canola	cytosol, mitochondrion	68.1	71.71
Bra031294.1-P	Field mustard	cytosol, plastid	67.91	71.51
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	72.57	71.38
Bra039553.1-P	Field mustard	plastid	65.67	71.26
CDY22925	Canola	plastid	65.67	71.26
CDY48287	Canola	plastid	65.86	71.17
AT4G15415.5	Thale cress	cytosol, plastid	68.66	70.5
Bra012790.1-P	Field mustard	mitochondrion, plastid	63.81	69.94
AT3G21650.2	Thale cress	nucleus, plastid	70.71	69.41
CDX90593	Canola	cytosol, plastid	60.07	69.4
CDY09766	Canola	mitochondrion, plastid	59.89	69.03
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	58.77	67.6
KRG94414	Soybean	plastid	64.74	66.35
KRG90768	Soybean	extracellular, mitochondrion	11.38	64.89
KRH31415	Soybean	cytosol, plastid	63.06	64.88
KRG97478	Soybean	cytosol, plastid	62.13	64.41
KRG94343	Soybean	cytosol, plastid	63.62	63.62
KRH67758	Soybean	plastid	55.78	63.62
KRG96039	Soybean	cytosol, plastid	55.41	63.6
KRH57624	Soybean	cytosol, mitochondrion	63.25	63.48
KRH19952	Soybean	cytosol	55.97	62.11
KRH32554	Soybean	cytosol	55.97	61.73
KRH61853	Soybean	plastid	52.61	56.85
KRH52526	Soybean	cytosol	52.61	56.74
KRH16045	Soybean	cytosol, mitochondrion, plastid	51.68	56.3
KRH05059	Soybean	cytosol, mitochondrion, plastid	51.31	55.89
KRH35993	Soybean	cytosol	50.0	55.26
KRH56674	Soybean	cytosol	49.44	51.46
KRH03791	Soybean	cytosol	49.07	51.17
KRH36100	Soybean	plastid	32.46	38.07

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100785874	MapMan:18.4.24.1.2.3	EMBL:ACUP02008519	InterPro:ARM-like	InterPro:ARM-type_fold
ProteinID:BAX25296.1	EnsemblPlantsGene:GLYMA_14G046800	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666
GO:GO:0050790	UniProt:I1M7F5	InterPro:IPR011989	EnsemblPlants:KRH14754	ProteinID:KRH14754	ProteinID:KRH14754.1
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF27	SUPFAM:SSF48371
UniParc:UPI000233AB79	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:3556874..3560405

Molecular Weight (calculated)

60962.1 Da

IEP (calculated)

8.096

GRAVY (calculated)

-0.266

Length

536 amino acids

Sequence
(BLAST)

001: MIKQIFGKIP RKPSKSSHNN SNGEGGFNDG FSLNSSSNTL LKSNSVSSKS SSSGSVGSRS GNETIAQHYS NQSKKSAPTT GSVMASAAYE ALPSFRDVPS
101: SEKHNLFIRK LNLCCVVFDF NDPAKHLKEK DVKRQTLLEL VDYVSSVSSK FNELVMQEMT KMVATNLFRT LPSSNHDGRL ADMGEPDEEE TVLEPAWPHL
201: QIVYEFLFRF VASPEMDAKL AKRYIDHSFV LRLLDLFDSE DQRERDYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHSGIAEL LEILGSIING
301: FALPLKEEHK LFLARALIPL HKPKCVALYH QQLSYCITQF VEKDVKLADT VVRGLLKYWP ITNSAKEVMF LSELEEVLEA TQAAEFQRCV IPLFRQIGRC
401: LNSLHFQVAE RALFLWNNDH IRNLILQNSK VILPIIFPAM EKNIRDHWNQ AVQSLTMNVR KIFSDADQAL FDECLKRFQE EEIKDREKQE KRESIWKQLE
501: DVAAANAVSS EAILVSRFVS SVAIATSANQ LATAGG

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.