Factsheet for PGSC0003DMT400017950

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g067980.2.1	Tomato	nucleus	95.8	95.8
PGSC0003DMT400052115	Potato	plastid	83.02	83.65
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	63.36	81.77
VIT_14s0219g00010.t01	Wine grape	cytosol	19.08	77.52
KRG94414	Soybean	plastid	77.29	77.44
PGSC0003DMT400045008	Potato	cytosol, plastid	71.37	74.5
KRH57624	Soybean	cytosol, mitochondrion	74.81	73.41
KRG94343	Soybean	cytosol, plastid	74.43	72.76
Os04t0485100-01	Rice	plasma membrane	70.42	72.5
KXG26587	Sorghum	mitochondrion	70.04	71.96
Os08t0122000-01	Rice	plasma membrane	70.23	71.32
HORVU2Hr1G083850.1	Barley	cytosol	67.56	70.8
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	67.94	70.78
EER93109	Sorghum	cytosol, plastid	70.04	70.71
TraesCS2A01G320700.2	Wheat	mitochondrion	67.56	70.38
TraesCS2D01G341400.3	Wheat	mitochondrion	67.37	70.18
HORVU5Hr1G120550.1	Barley	nucleus, plastid	68.32	70.06
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	69.08	70.02
TraesCS4A01G341600.1	Wheat	plastid	68.13	69.86
TraesCS7B01G214300.2	Wheat	nucleus	68.89	69.83
TraesCS7D01G310200.1	Wheat	cytosol, plastid	68.7	69.63
TraesCS5B01G533000.1	Wheat	plastid	68.13	69.59
OQU79819	Sorghum	cytosol	70.23	69.57
TraesCS7A01G313600.1	Wheat	nucleus	68.51	69.44
TraesCS5D01G531300.1	Wheat	plastid	67.94	69.4
Os03t0844500-01	Rice	cytosol	68.32	69.25
Os07t0274800-02	Rice	extracellular, plasma membrane	65.65	66.54
OQU88848	Sorghum	cytosol	63.36	65.87
PGSC0003DMT400034814	Potato	cytosol	25.95	64.45
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	66.6	64.04
HORVU0Hr1G004960.2	Barley	cytosol	59.16	62.37
PGSC0003DMT400060086	Potato	cytosol, plastid	54.96	60.63
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	56.49	60.16
PGSC0003DMT400067211	Potato	cytosol, plastid	52.1	54.82
PGSC0003DMT400002753	Potato	plastid	50.57	52.37
PGSC0003DMT400008785	Potato	cytosol	32.82	42.26

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:102597891	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	UniProt:M1A9T0
PFAM:PF01603	EnsemblPlantsGene:PGSC0003DMG400006970	PGSC:PGSC0003DMG400006970	EnsemblPlants:PGSC0003DMT400017950	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI000296C849	RefSeq:XP_006357177.1	SEG:seg

Description

Protein phosphatase 2a, regulatory subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400006970]

Coordinates

chr2:-:26650250..26658080

Molecular Weight (calculated)

60047.3 Da

IEP (calculated)

8.228

GRAVY (calculated)

-0.378

Length

524 amino acids

Sequence
(BLAST)

001: MIKQILNRLP RKPSKSGDNR DGGTSAFQSN ASNSSRSSDL SNSLPGSLSA LSLSGVTGSS APGLNHGDRL PQGINAKVNG HAAVFSYDAL PNLRDVPASE
101: KQNLFLKKLN LCCVLFDFSD PTKNTKEKEI KRQALVELVD YVTSANGKFT EIVMEAVIKM VSTNLFRPPS PQTRENKVLE GFDLEDDEPM MHPAWPHLQI
201: VYEFLLRFVA SPETDAKLAK RYVDHSFVLR LLDLFDSEDP REREYLKTVL HRIYGKFMVH RPFIRKSINN IFYRFIFETE KHNGIAELLE ILGSIINGFA
301: LPLKEEHKLF LVRALIPHHK PKCVQMYHQQ LSYCITQFVE KDCKLADTVI RGLLKYWPIT NSSKEVMFIG ELEEVLEATQ PPEFQRCMVP LFRRINRCLS
401: SSHFQVAERA LFLWNNDHVE NLIKQNRKVI LPIIFPALEK NARGHWNQAV QSLTLNVRKI FSDVDPELFE ECLRKFEEDQ AHEEENKTKR EMTWKRLEEI
501: AAMKTASNEP VLVSHRITPN SSTG

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.