Factsheet for Zm00001d039625_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00199	Sorghum	cytosol, mitochondrion, plastid	95.17	94.04
HORVU3Hr1G022550.2	Barley	cytosol	67.61	87.05
Os01t0178400-01	Rice	cytosol	35.41	85.85
TraesCS3A01G121400.1	Wheat	plastid	81.49	83.85
TraesCS3D01G123500.1	Wheat	plastid	81.49	83.85
TraesCS3B01G140800.1	Wheat	plastid	81.89	83.74
Zm00001d037626_P001	Maize	plastid	76.06	77.78
CDX87083	Canola	cytosol	43.46	61.36
VIT_04s0008g04270.t01	Wine grape	mitochondrion	56.14	56.71
KRH61853	Soybean	plastid	55.53	55.65
Zm00001d038944_P003	Maize	plastid	55.94	55.49
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	55.73	55.4
KRH52526	Soybean	cytosol	55.33	55.33
Zm00001d043447_P001	Maize	cytosol	19.11	55.23
KRH05059	Soybean	cytosol, mitochondrion, plastid	54.53	55.08
KRH16045	Soybean	cytosol, mitochondrion, plastid	54.33	54.88
Solyc06g065690.2.1	Tomato	cytosol, plastid	54.93	54.82
Bra009846.1-P	Field mustard	plastid	54.53	54.75
CDY05497	Canola	mitochondrion, plastid	53.32	54.64
CDY54903	Canola	mitochondrion, plastid	53.32	54.53
CDX88186	Canola	cytosol, plastid	54.12	54.34
PGSC0003DMT400067211	Potato	cytosol, plastid	54.33	54.22
VIT_11s0016g04500.t01	Wine grape	cytosol	58.15	54.12
CDX80521	Canola	plastid	53.92	54.03
Bra020504.1-P	Field mustard	mitochondrion, plastid	52.72	53.8
KRH56674	Soybean	cytosol	55.33	53.4
KRH03791	Soybean	cytosol	54.53	52.72
Zm00001d035140_P002	Maize	plastid	52.11	51.19
Zm00001d003256_P001	Maize	cytosol, mitochondrion	52.52	51.18
Solyc12g006920.1.1	Tomato	plastid	51.51	50.59
PGSC0003DMT400002753	Potato	plastid	51.51	50.59
Zm00001d025714_P001	Maize	mitochondrion	51.91	50.59
Zm00001d049642_P001	Maize	cytosol, plastid	50.7	50.2
Zm00001d009500_P002	Maize	plastid	48.89	48.6
Zm00001d013544_P002	Maize	cytosol, plastid	49.09	46.65
Zm00001d033370_P001	Maize	plastid	50.5	45.39
Zm00001d005501_P001	Maize	cytosol	46.48	42.94
Zm00001d034817_P001	Maize	cytosol	50.5	42.26
Zm00001d019363_P001	Maize	cytosol	45.07	41.56
Zm00001d049469_P001	Maize	mitochondrion	13.28	36.26
Zm00001d006254_P001	Maize	cytosol	32.19	34.56

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100273799	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:B4FXJ3
EMBL:BT041831	EMBL:BT067266	EMBL:BT088370	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234
GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	ProteinID:ONM29538.1	PFAM:PF01603	PIRSF:PIRSF028043
InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF16	SUPFAM:SSF48371	UniParc:UPI00017B7D02	EnsemblPlantsGene:Zm00001d039625
EnsemblPlants:Zm00001d039625_P001	EnsemblPlants:Zm00001d039625_T001	SEG:seg	:	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform

Coordinates

chr3:+:9377677..9380955

Molecular Weight (calculated)

56689.2 Da

IEP (calculated)

8.314

GRAVY (calculated)

-0.326

Length

497 amino acids

Sequence
(BLAST)

001: MWKQFIGKLS WKSMKSSSGS GGSPPAPLSS PRDNGASPRE NGATGKPNVS PRSPAAGAGA GAEVRSREDA FVQKVNICCA VYDFSDRGKD SPEKERKRQM
101: LMSLVDCIGA AEEPLTETMI AACVRMFAAN LFRVFPPKVR SGTSASETEE DEPFFDPSWY HLQVVYEFLL RFVTSPLVDA KVARKYVDSP FVSKLLDLFD
201: SDDPRERDCL KTILHRIYGK FMGNRPFIRK AVSNIFYRFV FETDHHNGIA ELLEVFGSVI SGFAKPLKEE HKLFLWKALI PLHKPKSMGV YLPQLTYCIT
301: QFIDKEPKLA GTVIRGLLKY WPVTNSQKEM MFLGELEEVL ELTDMAEFQK CMVPLFRKIA SCLNSSHFQV AERALFLWNN EHLFDMISQN RQVILPIIYP
401: ALERNTRWHW NQSVLNVTMN VRKMFRDMDE RLLQACHDNF QEEEEKRAVT EERRRLMWEQ LERSAARGYH QPTTIAADAS SFPAPSSSAR LVSLTVT

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.