Factsheet for GSMUA_Achr3P00600_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008785	Potato	cytosol	41.77	51.11
VIT_03s0038g02850.t01	Wine grape	cytosol	46.39	49.46
KRH36100	Soybean	plastid	45.18	49.23
Solyc01g111790.1.1	Tomato	mitochondrion, plastid	43.37	48.87
Zm00001d006254_P001	Maize	cytosol	44.18	47.52
EER99281	Sorghum	mitochondrion	44.78	47.35
HORVU5Hr1G084630.1	Barley	cytosol	43.78	46.68
TraesCS5D01G341500.1	Wheat	cytosol	43.57	46.37
TraesCS5B01G335800.1	Wheat	cytosol	43.57	46.07
TraesCS5A01G336800.1	Wheat	cytosol	42.97	45.82
Os09t0542700-00	Rice	cytosol	42.17	43.57
GSMUA_Achr6P29780_001	Banana	mitochondrion	29.92	39.73
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	32.13	36.45
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	27.91	35.37
GSMUA_AchrUn_...	Banana	cytosol	18.27	34.47
GSMUA_Achr7P07360_001	Banana	cytosol	28.11	33.73
GSMUA_Achr7P17010_001	Banana	mitochondrion	27.31	33.01
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	30.32	32.4
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	30.72	31.35
GSMUA_Achr8P32030_001	Banana	cytosol	30.12	31.18
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	29.32	30.29
GSMUA_AchrUn_...	Banana	cytosol	28.31	29.94
GSMUA_Achr8P26100_001	Banana	cytosol	28.51	29.58
GSMUA_AchrUn_...	Banana	cytosol	6.63	23.57
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	7.63	19.29

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr3G00600_001	EnsemblPlants:GSMUA_Achr3P00600_001	EnsemblPlants:GSMUA_Achr3T00600_001
InterPro:IPR011989	UniProt:M0SAM8	PFAM:PF01603	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF28
SUPFAM:SSF48371	UniParc:UPI000296C756	SEG:seg	:	:	:

Description

transposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G00600_001]

Coordinates

chr3:+:473850..476712

Molecular Weight (calculated)

56433.3 Da

IEP (calculated)

7.499

GRAVY (calculated)

-0.122

Length

498 amino acids

Sequence
(BLAST)

001: MGAPRPAAKA PPNRKSTTLR CLFDLDAVAH DAPLPPPSAD AEVDELLSSI SRCADPTLES PSQQQEVKRQ QLSRVLSAVR GATRPLDDTV WPPLVFMLSA
101: NLFRPLPPPA SPCLPPDLYE EDGLAMSLAP SWPHLHIVYD ILAALSEDPR ERNRLKNVFH ELYSKLASDR SFLRKSMNNV LLRYVFDGER HYGIGELLEI
201: WGSIINGFAV PLKEEHRLFL TRVLLPLHKP RGIGAYHRQL SYCVTQFVHK EPGLGEEVVK GILKRWPVTN CQKEVLLLGE LEDLLESLDP PQFERLAPPL
301: CARIARCSNS ASSQVAERAL YVWNSERFVK MASQSWEQVL PGIVECIERN LRWHWSKSVQ HLTTSVKSML EEMEPVLGWR WLAAQGHMMR GSQLKHLHLS
401: LKSVVVTYCE HTSCFSLKLS PKSTLVFLNI KVCQTCDQLR KCGAYVFLIL FSSCNRFLEL ELSIVSLSLS LASWLDFGHH LSLFYYENWK STECGCDV

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.