Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18668 | Canola | nucleus | 89.5 | 90.5 |
| Bra024434.1-P | Field mustard | nucleus | 61.33 | 67.27 |
| Bra031842.1-P | Field mustard | nucleus | 70.17 | 66.49 |
| VIT_00s0802g00020.t01 | Wine grape | cytosol | 58.01 | 58.33 |
| KRH04405 | Soybean | cytosol | 51.93 | 52.81 |
| PGSC0003DMT400055171 | Potato | cytosol | 51.38 | 52.54 |
| KRH58136 | Soybean | nucleus | 51.93 | 52.22 |
| Solyc02g092240.2.1 | Tomato | cytosol | 48.62 | 50.29 |
| GSMUA_Achr9P18980_001 | Banana | nucleus | 26.52 | 46.6 |
| GSMUA_Achr6P24780_001 | Banana | cytosol | 44.2 | 40.4 |
| GSMUA_Achr8P31090_001 | Banana | cytosol | 45.86 | 39.9 |
| GSMUA_Achr7P26140_001 | Banana | cytosol | 38.12 | 39.43 |
| GSMUA_Achr7P26120_001 | Banana | cytosol | 43.09 | 39.0 |
| GSMUA_Achr1P22560_001 | Banana | cytosol | 43.09 | 38.61 |
| Zm00001d048162_P001 | Maize | nucleus | 41.99 | 36.36 |
| Os03t0200200-01 | Rice | cytosol | 42.54 | 35.81 |
| Bra000609.1-P | Field mustard | cytosol | 30.94 | 35.67 |
| TraesCS4B01G260900.1 | Wheat | cytosol | 43.09 | 34.98 |
| Zm00001d028118_P001 | Maize | cytosol | 41.44 | 34.56 |
| TraesCS4A01G039700.1 | Wheat | cytosol | 43.09 | 34.51 |
| TraesCS4D01G260500.1 | Wheat | cytosol | 43.09 | 34.51 |
| Bra010130.1-P | Field mustard | nucleus | 29.83 | 33.75 |
| KXG39943 | Sorghum | cytosol | 41.44 | 33.63 |
| Bra027820.1-P | Field mustard | cytosol | 30.39 | 31.07 |
| Bra035874.1-P | Field mustard | cytosol | 28.18 | 30.54 |
| Bra035410.1-P | Field mustard | cytosol | 28.18 | 29.14 |
| Bra031717.1-P | Field mustard | cytosol | 26.52 | 28.92 |
| Os10t0352000-01 | Rice | cytosol | 22.1 | 24.24 |
Protein Annotations
| EnsemblPlants:Bra037835.1 | EnsemblPlants:Bra037835.1-P | EnsemblPlantsGene:Bra037835 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF1 |
| PFAM:PF14009 | SEG:seg | UniParc:UPI0002541BB1 | UniProt:M4F9S2 | MapMan:35.2 | : |
Description
AT5G67620 (E=8e-065) | unknown protein
Coordinates
chrA09:+:3836484..3837415
Molecular Weight (calculated)
19622.5 Da
IEP (calculated)
10.146
GRAVY (calculated)
-0.703
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAAEAA TVLIHHPAEN KVERIYWSVK ASDVMRSNPG HYVAVVVTSP TLKNDKGSPL KQLKLLRPDD TLLIGHVYRL VSFEEVLNEF ATKKCVKLGK
101: LLKEGGGLEL NKKKKKPRKK TDQEMGRVNP NSDPDPKEGG ANDTVAGQEG GDGLTRQSQG RGRGGGGWRP ALHSIPEFGS S
101: LLKEGGGLEL NKKKKKPRKK TDQEMGRVNP NSDPDPKEGG ANDTVAGQEG GDGLTRQSQG RGRGGGGWRP ALHSIPEFGS S
001: MGNCQAAEAA TVLIHHPAEN KVERIYWSVT ASDIMKSNPG HYVAVVVTSP TMKNEKGLPL KQLKLLRPDD TLLIGHVYRL VSFEEVLNEF ATKKCVKLGK
101: LLKEGGGLDL TKKKTKHRKK KLDQETGKVN PNSDPNPNQD GADNAVAGEN GGDGFMRRSH GGGRGGGGWR PALHSIPEFG SS
101: LLKEGGGLDL TKKKTKHRKK KLDQETGKVN PNSDPNPNQD GADNAVAGEN GGDGFMRRSH GGGRGGGGWR PALHSIPEFG SS
Arabidopsis Description
At5g67620 [Source:UniProtKB/TrEMBL;Acc:Q9FJW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.