Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 2
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0200200-01 Rice cytosol 35.15 26.98
GSMUA_Achr6P24780_001 Banana cytosol 31.52 26.26
VIT_00s0802g00020.t01 Wine grape cytosol 28.48 26.11
KRH58136 Soybean nucleus 28.48 26.11
KRH04405 Soybean cytosol 27.88 25.84
GSMUA_Achr8P31090_001 Banana cytosol 31.52 25.0
Solyc02g092240.2.1 Tomato cytosol 26.06 24.57
CDY43585 Canola nucleus 24.85 23.3
PGSC0003DMT400055171 Potato cytosol 24.85 23.16
CDY37844 Canola nucleus 24.85 22.91
AT5G67620.1 Thale cress nucleus 24.85 22.53
CDY18668 Canola nucleus 24.24 22.35
GSMUA_Achr1P22560_001 Banana cytosol 27.27 22.28
Bra037835.1-P Field mustard nucleus 24.24 22.1
Bra031842.1-P Field mustard nucleus 24.85 21.47
CDX81304 Canola nucleus 23.64 21.2
Os08t0420700-01 Rice cytosol, nucleus, plastid 23.03 20.11
Os09t0381600-01 Rice cytosol 24.85 19.71
Os06t0236300-01 Rice cytosol 21.82 19.05
CDY36508 Canola nucleus 18.18 18.18
Os02t0741700-01 Rice cytosol 18.18 18.07
Bra024434.1-P Field mustard nucleus 17.58 17.58
CDY08733 Canola nucleus 16.97 16.97
Protein Annotations
EnsemblPlants:Os10t0352000-01EnsemblPlantsGene:Os10g0352000InterPro:DUF4228_plantPANTHER:PTHR33413PANTHER:PTHR33413:SF13PFAM:PF14009
ProteinID:BAF26330.1ProteinID:BAT10472.1SEG:segUniParc:UPI0000DD9950UniProt:Q0IY85MapMan:35.2
Description
Conserved hypothetical protein. (Os10t0352000-01)
Coordinates
chr10:-:10748919..10751558
Molecular Weight (calculated)
17410.5 Da
IEP (calculated)
8.519
GRAVY (calculated)
-0.416
Length
165 amino acids
Sequence
(BLAST)
001: NPGHYVAEVV RPVATAPAAT AATASAPAAR RRLKLLRPDD TLVLGGVYRL VTFEDVLKQF VSKRNATMSR ATIATAAEDD DGHRRQGHRG GEAAAAAPAK
101: VAAQSRQENP SSPSPTDEAR PEPEPEPEPD LVATAMALGG RMSLSRHGQW RPALPSIAEG SVLCF
Best Arabidopsis Sequence Match ( AT5G67620.1 )
(BLAST)
001: MGNCQAAEAA TVLIHHPAEN KVERIYWSVT ASDIMKSNPG HYVAVVVTSP TMKNEKGLPL KQLKLLRPDD TLLIGHVYRL VSFEEVLNEF ATKKCVKLGK
101: LLKEGGGLDL TKKKTKHRKK KLDQETGKVN PNSDPNPNQD GADNAVAGEN GGDGFMRRSH GGGRGGGGWR PALHSIPEFG SS
Arabidopsis Description
At5g67620 [Source:UniProtKB/TrEMBL;Acc:Q9FJW1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.