Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os04t0471300-01 | |
| Os08t0497900-01 | |
| Os09t0481300-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G60010.1 | Os04t0471300-01 | AT4G26455.1 | 21798944 |
| AT1G60010.1 | Os08t0497900-01 | AT4G26455.1 | 21798944 |
| AT1G60010.1 | Os09t0481300-01 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P23980_001 | Banana | cytosol | 43.39 | 59.85 |
| Zm00001d032324_P001 | Maize | cytosol | 53.97 | 54.84 |
| OQU80443 | Sorghum | cytosol | 52.91 | 54.05 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 45.5 | 51.5 |
| Os09t0381600-01 | Rice | cytosol | 56.08 | 50.96 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 47.09 | 48.9 |
| TraesCS2D01G082400.1 | Wheat | cytosol, mitochondrion, nucleus | 49.21 | 46.73 |
| TraesCS2A01G084700.1 | Wheat | cytosol | 49.21 | 46.5 |
| TraesCS2A01G084600.1 | Wheat | cytosol | 48.68 | 46.46 |
| TraesCS2D01G082300.1 | Wheat | cytosol | 48.68 | 46.0 |
| KRH74672 | Soybean | cytosol | 41.8 | 45.93 |
| Os02t0741700-01 | Rice | cytosol | 40.21 | 45.78 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 48.15 | 45.5 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 48.15 | 45.5 |
| TraesCS2D01G082500.1 | Wheat | cytosol | 46.56 | 45.13 |
| TraesCS2D01G082600.1 | Wheat | cytosol | 48.15 | 45.05 |
| CDY00334 | Canola | nucleus | 38.1 | 45.0 |
| Bra010130.1-P | Field mustard | nucleus | 38.1 | 45.0 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 47.62 | 44.55 |
| TraesCS2A01G084400.1 | Wheat | cytosol | 47.09 | 44.5 |
| CDX84364 | Canola | cytosol | 37.57 | 44.38 |
| KRH69484 | Soybean | cytosol | 40.21 | 44.19 |
| AT5G62900.1 | Thale cress | cytosol | 37.57 | 44.1 |
| TraesCS2A01G084500.1 | Wheat | cytosol | 47.62 | 43.9 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 40.74 | 43.75 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 42.33 | 43.24 |
| HORVU2Hr1G013820.4 | Barley | cytosol | 46.03 | 43.07 |
| KRH45741 | Soybean | cytosol | 39.68 | 42.61 |
| Os06t0236300-01 | Rice | cytosol | 42.33 | 42.33 |
| KRG99257 | Soybean | cytosol | 38.62 | 41.95 |
| PGSC0003DMT400040233 | Potato | mitochondrion | 35.45 | 40.61 |
| Solyc05g006030.2.1 | Tomato | cytosol | 35.45 | 40.36 |
| KRH57030 | Soybean | cytosol | 38.1 | 40.0 |
| KRH03351 | Soybean | cytosol | 38.1 | 39.56 |
| VIT_01s0026g00730.t01 | Wine grape | cytosol | 36.51 | 39.43 |
| Solyc06g071320.2.1 | Tomato | cytosol | 32.28 | 39.35 |
| PGSC0003DMT400083024 | Potato | cytosol | 33.33 | 39.13 |
| AT5G50090.1 | Thale cress | cytosol | 32.8 | 38.99 |
| KRH63480 | Soybean | cytosol | 35.45 | 38.73 |
| CDY21433 | Canola | cytosol | 31.75 | 38.22 |
| Bra000609.1-P | Field mustard | cytosol | 31.22 | 37.58 |
| KRH54436 | Soybean | cytosol | 35.98 | 37.57 |
| Bra035874.1-P | Field mustard | cytosol | 32.8 | 37.13 |
| CDY69854 | Canola | cytosol | 34.39 | 36.93 |
| PGSC0003DMT400063216 | Potato | cytosol | 35.98 | 36.36 |
| CDX87268 | Canola | cytosol | 30.69 | 36.25 |
| Bra035410.1-P | Field mustard | cytosol | 33.33 | 36.0 |
| CDY24507 | Canola | cytosol | 33.33 | 36.0 |
| VIT_17s0000g07840.t01 | Wine grape | cytosol | 34.92 | 35.87 |
| Solyc03g114020.2.1 | Tomato | cytosol | 35.45 | 35.83 |
| CDY30923 | Canola | cytosol | 33.33 | 35.59 |
| Bra027820.1-P | Field mustard | cytosol | 33.33 | 35.59 |
| CDY70563 | Canola | cytosol | 33.33 | 35.2 |
| AT1G10530.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 30.69 | 34.94 |
| AT1G60010.1 | Thale cress | cytosol | 31.75 | 34.68 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 32.28 | 33.7 |
| Os03t0200200-01 | Rice | cytosol | 37.04 | 32.56 |
| Bra031717.1-P | Field mustard | cytosol | 28.57 | 32.53 |
| CDY07805 | Canola | nucleus | 28.57 | 32.53 |
| CDY34887 | Canola | cytosol | 28.57 | 32.53 |
| Os10t0352000-01 | Rice | cytosol | 20.11 | 23.03 |
Protein Annotations
| EnsemblPlants:Os08t0420700-01 | EnsemblPlantsGene:Os08g0420700 | EntrezGene:4345590 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF7 |
| PFAM:PF14009 | ProteinID:BAC24949.1 | ProteinID:BAC99452.1 | ProteinID:BAF23733.1 | ProteinID:BAT05463.1 | ProteinID:EAZ42765.1 |
| RefSeq:XP_015648741.1 | SEG:seg | UniParc:UPI00000AD886 | UniProt:Q8H341 | MapMan:35.2 | : |
Description
Conserved hypothetical protein. (Os08t0420700-01)
Coordinates
chr8:+:20144271..20145545
Molecular Weight (calculated)
20059.7 Da
IEP (calculated)
10.656
GRAVY (calculated)
-0.724
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAAEVA AVVIQHPGGK VERLYWPATA ADVMRSNPGH YVALVLLRVS ASSSGGGGGG KAEHSAVGAA VGDESGGAAA KITKIKLLKP KETLLLGKVY
101: RLVTSQEVTK ALQARRQEKM RRCKEVTDHH HRQPQTGDSA AAGEEQRRPS DHQERKPAEK DRHRSSGGGG GGRGRNWRPS LQSISESAS
101: RLVTSQEVTK ALQARRQEKM RRCKEVTDHH HRQPQTGDSA AAGEEQRRPS DHQERKPAEK DRHRSSGGGG GGRGRNWRPS LQSISESAS
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.