Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G60010.1 | CDX89333 | AT4G26455.1 | 21798944 |
| AT1G60010.1 | CDX94330 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027820.1-P | Field mustard | cytosol | 95.53 | 96.61 |
| CDY30923 | Canola | cytosol | 93.3 | 94.35 |
| AT1G60010.1 | Thale cress | cytosol | 70.95 | 73.41 |
| CDY24507 | Canola | cytosol | 69.83 | 71.43 |
| CDY69854 | Canola | cytosol | 69.27 | 70.45 |
| CDY07805 | Canola | nucleus | 52.51 | 56.63 |
| CDY34887 | Canola | cytosol | 52.51 | 56.63 |
| PGSC0003DMT400040233 | Potato | mitochondrion | 50.28 | 54.55 |
| Solyc05g006030.2.1 | Tomato | cytosol | 50.28 | 54.22 |
| VIT_01s0026g00730.t01 | Wine grape | cytosol | 51.4 | 52.57 |
| KRH69484 | Soybean | cytosol | 50.28 | 52.33 |
| KRH74672 | Soybean | cytosol | 49.72 | 51.74 |
| KRH45741 | Soybean | cytosol | 46.37 | 47.16 |
| KRG99257 | Soybean | cytosol | 45.81 | 47.13 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 32.4 | 42.34 |
| KXG30786 | Sorghum | cytosol | 39.66 | 42.26 |
| CDY00334 | Canola | nucleus | 37.43 | 41.88 |
| CDX84364 | Canola | cytosol | 37.43 | 41.88 |
| CDY21433 | Canola | cytosol | 35.75 | 40.76 |
| TraesCS7D01G194000.1 | Wheat | cytosol | 36.87 | 40.74 |
| TraesCS6A01G309500.1 | Wheat | cytosol | 40.22 | 40.0 |
| TraesCS7B01G098100.1 | Wheat | cytosol | 36.87 | 39.76 |
| TraesCS7A01G192700.1 | Wheat | cytosol | 36.31 | 38.92 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 36.31 | 38.92 |
| CDX87268 | Canola | cytosol | 34.08 | 38.12 |
| KXG19676 | Sorghum | cytosol | 36.87 | 37.93 |
| Os02t0741700-01 | Rice | cytosol | 34.64 | 37.35 |
| TraesCS6B01G339300.1 | Wheat | cytosol | 37.43 | 37.22 |
| TraesCS6D01G288900.1 | Wheat | cytosol | 37.43 | 37.22 |
| Zm00001d017998_P001 | Maize | cytosol | 35.75 | 36.99 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 36.31 | 36.93 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 37.43 | 36.81 |
| HORVU6Hr1G076380.4 | Barley | cytosol | 34.64 | 36.05 |
| Os06t0236300-01 | Rice | cytosol | 37.99 | 35.98 |
| EER96686 | Sorghum | cytosol | 35.75 | 35.75 |
| Zm00001d052277_P001 | Maize | cytosol | 33.52 | 35.71 |
| OQU80443 | Sorghum | cytosol | 36.87 | 35.68 |
| Zm00001d032324_P001 | Maize | cytosol | 36.31 | 34.95 |
| Zm00001d037251_P001 | Maize | cytosol | 35.2 | 34.81 |
| TraesCS5A01G200100.1 | Wheat | cytosol | 37.99 | 34.52 |
| Zm00001d044783_P001 | Maize | cytosol | 33.52 | 34.48 |
| Zm00001d020348_P001 | Maize | cytosol | 35.2 | 34.24 |
| TraesCS5D01G205700.1 | Wheat | cytosol | 37.99 | 34.0 |
| TraesCS5B01G198500.1 | Wheat | cytosol | 37.99 | 34.0 |
| HORVU5Hr1G059690.7 | Barley | nucleus | 38.55 | 33.99 |
| Os09t0381600-01 | Rice | cytosol | 39.11 | 33.65 |
| Os08t0420700-01 | Rice | cytosol, nucleus, plastid | 35.2 | 33.33 |
| TraesCS2D01G082500.1 | Wheat | cytosol | 36.31 | 33.33 |
| TraesCS2A01G084700.1 | Wheat | cytosol | 36.87 | 33.0 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 36.87 | 33.0 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 34.08 | 32.97 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 36.87 | 32.67 |
| TraesCS2D01G082600.1 | Wheat | cytosol | 36.87 | 32.67 |
| HORVU7Hr1G039360.7 | Barley | cytosol | 31.28 | 32.18 |
| HORVU7Hr1G039390.1 | Barley | cytosol | 29.61 | 31.93 |
| TraesCS2D01G082300.1 | Wheat | cytosol | 35.2 | 31.5 |
| TraesCS2A01G084400.1 | Wheat | cytosol | 35.2 | 31.5 |
| TraesCS2A01G084600.1 | Wheat | cytosol | 34.64 | 31.31 |
| CDY18668 | Canola | nucleus | 31.28 | 31.28 |
| TraesCS2A01G084500.1 | Wheat | cytosol | 35.75 | 31.22 |
| TraesCS2D01G082400.1 | Wheat | cytosol, mitochondrion, nucleus | 34.64 | 31.16 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 34.64 | 31.0 |
| HORVU2Hr1G013820.4 | Barley | cytosol | 34.64 | 30.69 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 34.08 | 30.5 |
| CDX81304 | Canola | nucleus | 31.28 | 30.43 |
| CDY43585 | Canola | nucleus | 28.49 | 28.98 |
| CDY37844 | Canola | nucleus | 28.49 | 28.49 |
| CDY08733 | Canola | nucleus | 25.14 | 27.27 |
| CDY36508 | Canola | nucleus | 24.58 | 26.67 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 24.58 | 24.31 |
Protein Annotations
| EnsemblPlants:CDY70563 | EnsemblPlantsGene:GSBRNA2T00004387001 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF4 | PFAM:PF14009 |
| ProteinID:CDY70563 | ProteinID:CDY70563.1 | UniParc:UPI0004EEA592 | UniProt:A0A078JSG3 | MapMan:35.2 | : |
Description
BnaAnng34150DBnaAnng34150D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JSG3]
Coordinates
chrLK042527:+:3..729
Molecular Weight (calculated)
20188.0 Da
IEP (calculated)
9.714
GRAVY (calculated)
-0.803
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: DEMGNCQAVD AAALVVQHPD GKLDRYYGPV PVAEIMRMYP GHYVSLIIPL PETNVPATTT KTVEDDKSER RVVKFTRVKL LRPTESLVLG HAYRLITSQE
101: VMKVLRAKKY AKTKKHQRET TEEKNPTSLE KKVAEESDKN QNQNMETNDE KQRAVLTSSG SSKSKTWRPS LQSISEATS
101: VMKVLRAKKY AKTKKHQRET TEEKNPTSLE KKVAEESDKN QNQNMETNDE KQRAVLTSSG SSKSKTWRPS LQSISEATS
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.