CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH56393
KRH62532

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60010.1	KRH56393	AT4G26455.1	21798944
AT1G60010.1	KRH62532	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45741	Soybean	cytosol	93.68	92.61
KRH74672	Soybean	cytosol	59.77	60.47
KRH69484	Soybean	cytosol	59.77	60.47
PGSC0003DMT400040233	Potato	mitochondrion	54.02	56.97
Solyc05g006030.2.1	Tomato	cytosol	54.02	56.63
VIT_01s0026g00730.t01	Wine grape	cytosol	52.87	52.57
AT1G60010.1	Thale cress	cytosol	49.43	49.71
CDY69854	Canola	cytosol	48.85	48.3
Bra035410.1-P	Field mustard	cytosol	48.28	48.0
CDY24507	Canola	cytosol	48.28	48.0
AT1G10530.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	45.4	47.59
Bra031717.1-P	Field mustard	cytosol	45.4	47.59
GSMUA_Achr5P23980_001	Banana	cytosol	37.36	47.45
CDY34887	Canola	cytosol	44.83	46.99
CDY07805	Canola	nucleus	44.83	46.99
Bra027820.1-P	Field mustard	cytosol	47.7	46.89
CDY30923	Canola	cytosol	47.7	46.89
KXG30786	Sorghum	cytosol	44.83	46.43
TraesCS7B01G098100.1	Wheat	cytosol	44.25	46.39
CDY70563	Canola	cytosol	47.13	45.81
KRH63480	Soybean	cytosol	45.4	45.66
TraesCS7A01G192700.1	Wheat	cytosol	43.68	45.51
GSMUA_Achr9P28200_001	Banana	cytosol	43.68	45.51
GSMUA_Achr3P06040_001	Banana	cytosol	45.98	45.45
TraesCS7D01G194000.1	Wheat	cytosol	41.95	45.06
KRH57030	Soybean	cytosol	46.55	45.0
Zm00001d017998_P001	Maize	cytosol	44.25	44.51
KRH03351	Soybean	cytosol	45.98	43.96
KRH54436	Soybean	cytosol	45.4	43.65
TraesCS6A01G309500.1	Wheat	cytosol	43.1	41.67
Zm00001d037251_P001	Maize	cytosol	43.1	41.44
TraesCS6D01G288900.1	Wheat	cytosol	41.95	40.56
TraesCS6B01G339300.1	Wheat	cytosol	41.95	40.56
Zm00001d020348_P001	Maize	cytosol	42.53	40.22
Zm00001d052277_P001	Maize	cytosol	38.51	39.88
Os02t0741700-01	Rice	cytosol	37.93	39.76
EER96686	Sorghum	cytosol	40.8	39.66
KXG19676	Sorghum	cytosol	39.66	39.66
GSMUA_Achr9P18270_001	Banana	cytosol	41.38	39.56
OQU80443	Sorghum	cytosol	41.95	39.46
Zm00001d044783_P001	Maize	cytosol	39.08	39.08
TraesCS5B01G198500.1	Wheat	cytosol	44.83	39.0
Os08t0420700-01	Rice	cytosol, nucleus, plastid	41.95	38.62
Os06t0236300-01	Rice	cytosol	41.95	38.62
TraesCS5D01G205700.1	Wheat	cytosol	44.25	38.5
TraesCS5B01G198400.1	Wheat	cytosol	44.25	38.5
Os09t0381600-01	Rice	cytosol	45.98	38.46
HORVU6Hr1G076380.4	Barley	cytosol	37.93	38.37
TraesCS5A01G200100.1	Wheat	cytosol	43.1	38.07
Zm00001d032324_P001	Maize	cytosol	39.66	37.1
GSMUA_Achr3P10380_001	Banana	cytosol, nucleus, plastid	39.08	36.76
HORVU7Hr1G039390.1	Barley	cytosol	35.06	36.75
TraesCS2A01G084400.1	Wheat	cytosol	41.95	36.5
HORVU5Hr1G059690.7	Barley	nucleus	42.53	36.45
TraesCS2D01G082500.1	Wheat	cytosol	40.8	36.41
TraesCS2A01G084600.1	Wheat	cytosol	41.38	36.36
HORVU7Hr1G039360.7	Barley	cytosol	36.21	36.21
TraesCS2D01G082600.1	Wheat	cytosol	41.95	36.14
TraesCS2D01G082300.1	Wheat	cytosol	41.38	36.0
TraesCS2B01G099100.1	Wheat	nucleus	41.38	36.0
TraesCS2D01G082400.1	Wheat	cytosol, mitochondrion, nucleus	40.23	35.18
TraesCS2B01G099400.1	Wheat	cytosol	40.8	35.15
TraesCS2A01G084700.1	Wheat	cytosol	40.23	35.0
TraesCS2B01G099200.1	Wheat	nucleus	40.23	35.0
HORVU2Hr1G013820.4	Barley	cytosol	40.23	34.65
TraesCS2A01G084500.1	Wheat	cytosol	40.8	34.63
KRH04405	Soybean	cytosol	35.06	34.27
KRH58136	Soybean	nucleus	33.91	32.78
TraesCS2B01G098900.1	Wheat	nucleus, plastid	30.46	29.28

Protein Annotations

EMBL:ACUP02011019	EnsemblPlants:KRG99257	EnsemblPlantsGene:GLYMA_18G133300	EntrezGene:100814458	InterPro:DUF4228_plant	PANTHER:PTHR33413
PANTHER:PTHR33413:SF4	PFAM:PF14009	ProteinID:KRG99257	ProteinID:KRG99257.1	SEG:seg	UniParc:UPI000233E98D
UniProt:K7MRV0	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:19011025..19013600

Molecular Weight (calculated)

19203.4 Da

IEP (calculated)

10.501

GRAVY (calculated)

-0.299

Length

174 amino acids

Sequence
(BLAST)

001: MGNCQAVDAA ALVIQHPSGK IERLYWPVSA SEVMRTNPGH YVSLIIPLAV PPDQGQINQA QKAVLFTRVK LLRPNETLTL GHAYRLVTTQ EVVKAVKAKK
101: HAKMRKPQVK AMEGMQIVQL EKAVSDSETG GMLDTGNIYQ AMRTDRYRLL SSTHAALKPK SWRPSLQSIS ESAS

Best Arabidopsis Sequence Match ( AT1G10530.1 )
(BLAST)

001: MGNCQAVNAA VLVLQHPGGI IDRYYSSVSV TEVMAMYPGH YVSLIIPLSE EEEKNIPATE KGDDKKQRKA VRFTRVQLLR PTENLVLGHA YRLITSQEVM
101: KVLREKKSAK TKKHQIEKTT TAKKFSDKKV PEKKQGKQFR VIRNSTSLLK SKTWRPSLQS ISEATS

Arabidopsis Description

At1g10530 [Source:UniProtKB/TrEMBL;Acc:Q7XJ59]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.