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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • plastid 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr3P04120_001
GSMUA_Achr4P01630_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G60010.1 GSMUA_Achr10P... AT4G26455.1 21798944
AT1G60010.1 GSMUA_Achr3P04120_001 AT4G26455.1 21798944
AT1G60010.1 GSMUA_Achr4P01630_001 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P23980_001 Banana cytosol 57.48 70.07
GSMUA_Achr9P18270_001 Banana cytosol 71.86 65.93
GSMUA_Achr3P10380_001 Banana cytosol, nucleus, plastid 64.67 58.38
GSMUA_Achr3P06040_001 Banana cytosol 56.29 53.41
Zm00001d017998_P001 Maize cytosol 53.89 52.02
KXG30786 Sorghum cytosol 52.1 51.79
TraesCS7D01G194000.1 Wheat cytosol 49.1 50.62
EER96686 Sorghum cytosol 52.69 49.16
TraesCS7B01G098100.1 Wheat cytosol 48.5 48.8
TraesCS7A01G192700.1 Wheat cytosol 47.9 47.9
Zm00001d020348_P001 Maize cytosol 52.69 47.83
TraesCS6A01G309500.1 Wheat cytosol 50.9 47.22
TraesCS6B01G339300.1 Wheat cytosol 50.9 47.22
TraesCS6D01G288900.1 Wheat cytosol 50.9 47.22
KXG19676 Sorghum cytosol 48.5 46.55
Os09t0381600-01 Rice cytosol 57.48 46.15
KRH74672 Soybean cytosol 47.31 45.93
Zm00001d052277_P001 Maize cytosol 46.11 45.83
Os08t0420700-01 Rice cytosol, nucleus, plastid 51.5 45.5
TraesCS5A01G200100.1 Wheat cytosol 53.29 45.18
TraesCS5B01G198500.1 Wheat cytosol 53.89 45.0
KRH69484 Soybean cytosol 46.11 44.77
Os02t0741700-01 Rice cytosol 44.31 44.58
TraesCS5B01G198400.1 Wheat cytosol 53.29 44.5
TraesCS5D01G205700.1 Wheat cytosol 53.29 44.5
HORVU5Hr1G059690.7 Barley nucleus 53.89 44.34
OQU80443 Sorghum cytosol 49.1 44.32
Zm00001d037251_P001 Maize cytosol 47.9 44.2
KRG99257 Soybean cytosol 45.51 43.68
VIT_01s0026g00730.t01 Wine grape cytosol 45.51 43.43
Os06t0236300-01 Rice cytosol 49.1 43.39
PGSC0003DMT400040233 Potato mitochondrion 42.52 43.03
Zm00001d032324_P001 Maize cytosol 47.9 43.01
Solyc05g006030.2.1 Tomato cytosol 42.52 42.77
KRH45741 Soybean cytosol 44.91 42.61
KRH63480 Soybean cytosol 43.11 41.62
HORVU6Hr1G076380.4 Barley cytosol 42.52 41.28
AT1G60010.1 Thale cress cytosol 42.52 41.04
AT5G50090.1 Thale cress cytosol 38.92 40.88
GSMUA_Achr9P18980_001 Banana nucleus 25.15 40.78
KRH57030 Soybean cytosol 43.71 40.56
TraesCS2D01G082400.1 Wheat cytosol, mitochondrion, nucleus 47.9 40.2
Bra010130.1-P Field mustard nucleus 38.32 40.0
CDY00334 Canola nucleus 38.32 40.0
CDX84364 Canola cytosol 38.32 40.0
CDY24507 Canola cytosol 41.92 40.0
Bra035410.1-P Field mustard cytosol 41.92 40.0
KRH54436 Soybean cytosol 43.11 39.78
AT1G10530.1 Thale cress cytosol, mitochondrion, nucleus, plastid 39.52 39.76
VIT_17s0000g07840.t01 Wine grape cytosol 43.71 39.67
HORVU7Hr1G039360.7 Barley cytosol 41.32 39.66
TraesCS2B01G099200.1 Wheat nucleus 47.31 39.5
TraesCS2B01G099100.1 Wheat nucleus 47.31 39.5
Bra000609.1-P Field mustard cytosol 37.13 39.49
TraesCS2D01G082500.1 Wheat cytosol 46.11 39.49
Solyc06g071320.2.1 Tomato cytosol 36.53 39.35
HORVU7Hr1G039390.1 Barley cytosol 38.92 39.16
KRH03351 Soybean cytosol 42.52 39.01
TraesCS2A01G084700.1 Wheat cytosol 46.71 39.0
TraesCS2D01G082300.1 Wheat cytosol 46.71 39.0
TraesCS2A01G084600.1 Wheat cytosol 46.11 38.89
TraesCS2B01G099400.1 Wheat cytosol 46.71 38.61
TraesCS2A01G084500.1 Wheat cytosol 47.31 38.54
AT5G62900.1 Thale cress cytosol 37.13 38.51
Zm00001d044783_P001 Maize cytosol 40.12 38.51
TraesCS2A01G084400.1 Wheat cytosol 46.11 38.5
CDY21433 Canola cytosol 35.93 38.22
HORVU2Hr1G013820.4 Barley cytosol 46.11 38.12
CDY69854 Canola cytosol 40.12 38.07
TraesCS2D01G082600.1 Wheat cytosol 45.51 37.62
PGSC0003DMT400063216 Potato cytosol 41.92 37.43
CDY07805 Canola nucleus 37.13 37.35
CDY30923 Canola cytosol 39.52 37.29
PGSC0003DMT400083024 Potato cytosol 35.93 37.27
Bra035874.1-P Field mustard cytosol 37.13 37.13
Bra031717.1-P Field mustard cytosol 36.53 36.75
Bra027820.1-P Field mustard cytosol 38.92 36.72
Solyc03g114020.2.1 Tomato cytosol 40.72 36.36
CDY70563 Canola cytosol 38.92 36.31
CDY34887 Canola cytosol 35.93 36.14
CDX87268 Canola cytosol 32.34 33.75
GSMUA_Achr7P26140_001 Banana cytosol 33.53 32.0
GSMUA_Achr8P31090_001 Banana cytosol 36.53 29.33
GSMUA_Achr6P24780_001 Banana cytosol 34.13 28.79
TraesCS2B01G098900.1 Wheat nucleus, plastid 31.14 28.73
GSMUA_Achr1P22560_001 Banana cytosol 34.13 28.22
GSMUA_Achr7P26120_001 Banana cytosol 31.74 26.5
Protein Annotations
EnsemblPlants:GSMUA_Achr9P28200_001EnsemblPlants:GSMUA_Achr9T28200_001EnsemblPlantsGene:GSMUA_Achr9G28200_001InterPro:DUF4228_plantPANTHER:PTHR33413PANTHER:PTHR33413:SF7
PFAM:PF14009UniParc:UPI000295DE76UniProt:M0U477MapMan:35.2::
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G28200_001]
Coordinates
chr9:-:32270340..32271359
Molecular Weight (calculated)
19068.8 Da
IEP (calculated)
10.599
GRAVY (calculated)
-0.863
Length
167 amino acids
Sequence
(BLAST)
001: MGNCQASEVA TVVIQHPGGR VERLYWPTSA ADVMKTNPGY HVALVSLYVS EEKQDGSSVR FTRVKLLKPK DMLLLGQVYR LITSQEVTKA LRQRKYEKIR
101: KSQAELIRKQ QQEHRTKDQD GEANLEDSRS RHQATKQGSD RQKSSIQMAV RGRQWRPSLQ SISEMGS
Best Arabidopsis Sequence Match ( AT1G60010.1 )
(BLAST)
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.