Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000609.1-P | Field mustard | cytosol | 86.62 | 86.62 |
| AT5G50090.1 | Thale cress | cytosol | 80.25 | 79.25 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 38.85 | 44.53 |
| KRH03351 | Soybean | cytosol | 51.59 | 44.51 |
| CDX84364 | Canola | cytosol | 45.22 | 44.38 |
| CDY00334 | Canola | nucleus | 45.22 | 44.38 |
| KRH63480 | Soybean | cytosol | 47.77 | 43.35 |
| KRH57030 | Soybean | cytosol | 49.68 | 43.33 |
| VIT_17s0000g07840.t01 | Wine grape | cytosol | 50.32 | 42.93 |
| PGSC0003DMT400083024 | Potato | cytosol | 42.04 | 40.99 |
| Solyc06g071320.2.1 | Tomato | cytosol | 40.13 | 40.65 |
| KRH54436 | Soybean | cytosol | 46.5 | 40.33 |
| PGSC0003DMT400063216 | Potato | cytosol | 47.13 | 39.57 |
| Solyc03g114020.2.1 | Tomato | cytosol | 47.13 | 39.57 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 41.4 | 36.93 |
| CDX87268 | Canola | cytosol | 37.58 | 36.88 |
| Zm00001d017998_P001 | Maize | cytosol | 40.13 | 36.42 |
| KXG30786 | Sorghum | cytosol | 38.85 | 36.31 |
| CDY30923 | Canola | cytosol | 40.76 | 36.16 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 38.22 | 35.93 |
| CDY69854 | Canola | cytosol | 40.13 | 35.8 |
| CDY70563 | Canola | cytosol | 40.76 | 35.75 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 41.4 | 35.71 |
| KXG19676 | Sorghum | cytosol | 39.49 | 35.63 |
| TraesCS7B01G098100.1 | Wheat | cytosol | 37.58 | 35.54 |
| CDY07805 | Canola | nucleus | 37.58 | 35.54 |
| CDY34887 | Canola | cytosol | 37.58 | 35.54 |
| CDY24507 | Canola | cytosol | 39.49 | 35.43 |
| TraesCS7A01G192700.1 | Wheat | cytosol | 37.58 | 35.33 |
| TraesCS7D01G194000.1 | Wheat | cytosol | 36.31 | 35.19 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 40.76 | 34.59 |
| TraesCS6B01G339300.1 | Wheat | cytosol | 39.49 | 34.44 |
| TraesCS6D01G288900.1 | Wheat | cytosol | 39.49 | 34.44 |
| EER96686 | Sorghum | cytosol | 38.22 | 33.52 |
| OQU80443 | Sorghum | cytosol | 39.49 | 33.51 |
| Zm00001d037251_P001 | Maize | cytosol | 38.22 | 33.15 |
| HORVU6Hr1G076380.4 | Barley | cytosol | 36.31 | 33.14 |
| TraesCS6A01G309500.1 | Wheat | cytosol | 37.58 | 32.78 |
| Os02t0741700-01 | Rice | cytosol | 34.39 | 32.53 |
| Zm00001d052277_P001 | Maize | cytosol | 34.39 | 32.14 |
| Os08t0420700-01 | Rice | cytosol, nucleus, plastid | 38.22 | 31.75 |
| Zm00001d032324_P001 | Maize | cytosol | 37.58 | 31.72 |
| Zm00001d020348_P001 | Maize | cytosol | 36.31 | 30.98 |
| CDY43585 | Canola | nucleus | 34.39 | 30.68 |
| TraesCS5B01G198500.1 | Wheat | cytosol | 38.85 | 30.5 |
| Zm00001d044783_P001 | Maize | cytosol | 33.76 | 30.46 |
| Os09t0381600-01 | Rice | cytosol | 40.13 | 30.29 |
| CDY18668 | Canola | nucleus | 34.39 | 30.17 |
| CDY37844 | Canola | nucleus | 34.39 | 30.17 |
| Os06t0236300-01 | Rice | cytosol | 36.31 | 30.16 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 38.22 | 30.0 |
| TraesCS5D01G205700.1 | Wheat | cytosol | 38.22 | 30.0 |
| TraesCS2D01G082300.1 | Wheat | cytosol | 38.22 | 30.0 |
| TraesCS2A01G084700.1 | Wheat | cytosol | 38.22 | 30.0 |
| TraesCS5A01G200100.1 | Wheat | cytosol | 37.58 | 29.95 |
| TraesCS2A01G084600.1 | Wheat | cytosol | 37.58 | 29.8 |
| TraesCS2D01G082400.1 | Wheat | cytosol, mitochondrion, nucleus | 37.58 | 29.65 |
| HORVU7Hr1G039390.1 | Barley | cytosol | 31.21 | 29.52 |
| TraesCS2A01G084500.1 | Wheat | cytosol | 38.22 | 29.27 |
| TraesCS2D01G082600.1 | Wheat | cytosol | 37.58 | 29.21 |
| HORVU5Hr1G059690.7 | Barley | nucleus | 37.58 | 29.06 |
| TraesCS2A01G084400.1 | Wheat | cytosol | 36.94 | 29.0 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 36.94 | 29.0 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 36.94 | 29.0 |
| HORVU7Hr1G039360.7 | Barley | cytosol | 31.85 | 28.74 |
| HORVU2Hr1G013820.4 | Barley | cytosol | 36.94 | 28.71 |
| CDX81304 | Canola | nucleus | 33.12 | 28.26 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 36.31 | 28.22 |
| TraesCS2D01G082500.1 | Wheat | cytosol | 35.03 | 28.21 |
| CDY08733 | Canola | nucleus | 29.3 | 27.88 |
| CDY36508 | Canola | nucleus | 28.66 | 27.27 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 26.11 | 22.65 |
Protein Annotations
| EnsemblPlants:CDY21433 | EnsemblPlantsGene:GSBRNA2T00015827001 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF5 | PFAM:PF14009 |
| ProteinID:CDY21433 | ProteinID:CDY21433.1 | SEG:seg | UniParc:UPI0004EE2FAF | UniProt:A0A078G9L2 | MapMan:35.2 |
Description
BnaC03g27640DBnaC03g27640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9L2]
Coordinates
chrLK032121:-:17147..18437
Molecular Weight (calculated)
17372.4 Da
IEP (calculated)
10.454
GRAVY (calculated)
-0.483
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAVDTT RIVIQHPNGK EEMLSCPVSA SYVMKMNLGH CVALLISTTA LSASPGHGGP LRLTRIKLLR PTETLVLGHV YRLITTKEVM KGLMAKKCSK
101: SKKEGKMSED KVEMVKAFSS NKLDNEDQMK KQEKERPLRI SRSWQPSLKS RAEGGSS
101: SKKEGKMSED KVEMVKAFSS NKLDNEDQMK KQEKERPLRI SRSWQPSLKS RAEGGSS
001: MGNCQAVDTA RVVIQHPNGK EEKLSCPVSA SYVMKMNPGH CVSLLISTTA LSSASSGHGG PLRLTRIKLL RPTDTLVLGH VYRLITTKEV MKGLMAKKCS
101: KLKKESKGSD DKLEMVKAIN STKLDNEDQL QMKKQEKERS RISRSWQPSL QSISEGGSS
101: KLKKESKGSD DKLEMVKAIN STKLDNEDQL QMKKQEKERS RISRSWQPSL QSISEGGSS
Arabidopsis Description
At5g50090 [Source:UniProtKB/TrEMBL;Acc:Q9FGA2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.