Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g114020.2.1 | Tomato | cytosol | 73.8 | 73.8 |
| PGSC0003DMT400083024 | Potato | cytosol | 45.99 | 53.42 |
| KRH63480 | Soybean | cytosol | 47.59 | 51.45 |
| KRH54436 | Soybean | cytosol | 49.2 | 50.83 |
| KRH57030 | Soybean | cytosol | 48.66 | 50.56 |
| VIT_17s0000g07840.t01 | Wine grape | cytosol | 49.2 | 50.0 |
| KRH03351 | Soybean | cytosol | 48.66 | 50.0 |
| AT5G50090.1 | Thale cress | cytosol | 41.71 | 49.06 |
| Bra000609.1-P | Field mustard | cytosol | 40.64 | 48.41 |
| CDY21433 | Canola | cytosol | 39.57 | 47.13 |
| GSMUA_Achr5P23980_001 | Banana | cytosol | 34.22 | 46.72 |
| PGSC0003DMT400040233 | Potato | mitochondrion | 40.64 | 46.06 |
| CDY00334 | Canola | nucleus | 37.43 | 43.75 |
| CDX84364 | Canola | cytosol | 37.43 | 43.75 |
| Bra010130.1-P | Field mustard | nucleus | 37.43 | 43.75 |
| KXG30786 | Sorghum | cytosol | 38.5 | 42.86 |
| GSMUA_Achr9P18270_001 | Banana | cytosol | 41.71 | 42.86 |
| Zm00001d017998_P001 | Maize | cytosol | 39.57 | 42.77 |
| GSMUA_Achr3P06040_001 | Banana | cytosol | 40.11 | 42.61 |
| AT5G62900.1 | Thale cress | cytosol | 36.36 | 42.24 |
| GSMUA_Achr9P28200_001 | Banana | cytosol | 37.43 | 41.92 |
| TraesCS6B01G339300.1 | Wheat | cytosol | 39.57 | 41.11 |
| TraesCS6D01G288900.1 | Wheat | cytosol | 39.57 | 41.11 |
| GSMUA_Achr3P10380_001 | Banana | cytosol, nucleus, plastid | 40.64 | 41.08 |
| KXG19676 | Sorghum | cytosol | 37.97 | 40.8 |
| EER96686 | Sorghum | cytosol | 39.04 | 40.78 |
| TraesCS7D01G194000.1 | Wheat | cytosol | 35.29 | 40.74 |
| TraesCS6A01G309500.1 | Wheat | cytosol | 38.5 | 40.0 |
| Zm00001d020348_P001 | Maize | cytosol | 39.04 | 39.67 |
| TraesCS7B01G098100.1 | Wheat | cytosol | 34.76 | 39.16 |
| TraesCS7A01G192700.1 | Wheat | cytosol | 34.76 | 38.92 |
| Os06t0236300-01 | Rice | cytosol | 39.04 | 38.62 |
| Bra035874.1-P | Field mustard | cytosol | 34.22 | 38.32 |
| Zm00001d037251_P001 | Maize | cytosol | 36.9 | 38.12 |
| Zm00001d052277_P001 | Maize | cytosol | 34.22 | 38.1 |
| Zm00001d032324_P001 | Maize | cytosol | 37.43 | 37.63 |
| Os02t0741700-01 | Rice | cytosol | 32.62 | 36.75 |
| Os09t0381600-01 | Rice | cytosol | 40.64 | 36.54 |
| CDX87268 | Canola | cytosol | 31.02 | 36.25 |
| OQU80443 | Sorghum | cytosol | 35.83 | 36.22 |
| TraesCS5A01G200100.1 | Wheat | cytosol | 37.97 | 36.04 |
| Os08t0420700-01 | Rice | cytosol, nucleus, plastid | 36.36 | 35.98 |
| HORVU6Hr1G076380.4 | Barley | cytosol | 32.62 | 35.47 |
| TraesCS5B01G198500.1 | Wheat | cytosol | 37.43 | 35.0 |
| TraesCS5D01G205700.1 | Wheat | cytosol | 37.43 | 35.0 |
| TraesCS5B01G198400.1 | Wheat | cytosol | 37.43 | 35.0 |
| Zm00001d044783_P001 | Maize | cytosol | 32.09 | 34.48 |
| HORVU5Hr1G059690.7 | Barley | nucleus | 37.43 | 34.48 |
| HORVU7Hr1G039390.1 | Barley | cytosol | 29.95 | 33.73 |
| PGSC0003DMT400055171 | Potato | cytosol | 31.55 | 33.33 |
| HORVU7Hr1G039360.7 | Barley | cytosol | 30.48 | 32.76 |
| TraesCS2A01G084600.1 | Wheat | cytosol | 33.69 | 31.82 |
| TraesCS2B01G099100.1 | Wheat | nucleus | 33.69 | 31.5 |
| TraesCS2D01G082500.1 | Wheat | cytosol | 32.62 | 31.28 |
| TraesCS2D01G082400.1 | Wheat | cytosol, mitochondrion, nucleus | 33.16 | 31.16 |
| TraesCS2A01G084400.1 | Wheat | cytosol | 33.16 | 31.0 |
| TraesCS2A01G084700.1 | Wheat | cytosol | 33.16 | 31.0 |
| TraesCS2D01G082300.1 | Wheat | cytosol | 32.62 | 30.5 |
| TraesCS2B01G099200.1 | Wheat | nucleus | 32.62 | 30.5 |
| TraesCS2A01G084500.1 | Wheat | cytosol | 33.16 | 30.24 |
| TraesCS2B01G099400.1 | Wheat | cytosol | 32.62 | 30.2 |
| HORVU2Hr1G013820.4 | Barley | cytosol | 32.09 | 29.7 |
| TraesCS2D01G082600.1 | Wheat | cytosol | 32.09 | 29.7 |
| TraesCS2B01G098900.1 | Wheat | nucleus, plastid | 19.25 | 19.89 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400063216 | EnsemblPlantsGene:PGSC0003DMG400024587 | EntrezGene:102586791 | InterPro:DUF4228_plant | PANTHER:PTHR33413 | PANTHER:PTHR33413:SF5 |
| PFAM:PF14009 | PGSC:PGSC0003DMG400024587 | RefSeq:XP_006345026.1 | SEG:seg | UniParc:UPI0002959FB6 | UniProt:M1CA96 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400024587]
Coordinates
chr3:-:53880366..53881973
Molecular Weight (calculated)
20650.8 Da
IEP (calculated)
10.723
GRAVY (calculated)
-0.699
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCQAIDNA TLLIQHPSGR VDKLYWPVTA NEIMKMNPGH YVALLLTTTT LCPPTNPSSA TASTAKKINS ATTNNGGTNN MPVRITRIKL LKPTDTLVLG
101: HVYRLITTQE VMKGLWAKKY SKMKQQQLES GDKSSEKSTN SHSKNGVVRR SDLDNSKQVK QEKHRSSTGA KPRTWHPKLH SISEATS
101: HVYRLITTQE VMKGLWAKKY SKMKQQQLES GDKSSEKSTN SHSKNGVVRR SDLDNSKQVK QEKHRSSTGA KPRTWHPKLH SISEATS
001: MGNCQAVDAA ALVLQHPDGK IDRYYGPVSV SEIMRMYPGH YVSLIIPLPE KNIPATTTTT DDKSERKVVR FTRVKLLRPT ENLVLGHAYR LITSQEVMKV
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
101: LRAKKYAKTK KHQSETSKEK KKPSSEKKID EESDKNQNLE TKDEKQRSVL TNSASSRSKT WRPSLQSISE ATS
Arabidopsis Description
D-ribose-binding periplasmic protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.