Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G055550.3 | Barley | nucleus | 71.75 | 73.01 |
| TraesCS3B01G253700.2 | Wheat | nucleus | 71.25 | 72.24 |
| TraesCS3D01G229400.1 | Wheat | nucleus | 70.26 | 71.14 |
| EES03295 | Sorghum | nucleus | 66.05 | 66.79 |
| TraesCS3A01G224200.2 | Wheat | nucleus | 68.65 | 66.43 |
| Zm00001d044191_P004 | Maize | nucleus | 65.06 | 66.12 |
| Zm00001d011373_P002 | Maize | nucleus | 66.29 | 65.97 |
| Os05t0586400-01 | Rice | nucleus | 45.35 | 46.92 |
| Bra037384.1-P | Field mustard | nucleus | 12.64 | 44.54 |
| CDX79176 | Canola | cytosol | 5.33 | 38.05 |
| CDX91876 | Canola | nucleus | 20.94 | 28.94 |
| CDY48504 | Canola | nucleus | 19.95 | 28.6 |
| CDY15177 | Canola | nucleus | 19.7 | 28.55 |
| CDX90032 | Canola | nucleus | 19.58 | 28.21 |
| Bra000943.1-P | Field mustard | nucleus | 20.57 | 27.67 |
| CDY67475 | Canola | nucleus | 20.07 | 27.41 |
| Bra033264.1-P | Field mustard | nucleus | 19.45 | 27.02 |
| CDY07174 | Canola | nucleus | 20.94 | 26.57 |
| CDY42041 | Canola | cytosol | 21.07 | 26.32 |
| CDX80013 | Canola | nucleus | 21.69 | 26.32 |
| Bra004541.1-P | Field mustard | nucleus | 21.44 | 25.78 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 26.77 | 25.44 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 21.19 | 24.71 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 23.67 | 24.46 |
| AT1G01440.1 | Thale cress | nucleus | 19.95 | 24.25 |
| AT2G46380.1 | Thale cress | nucleus | 22.92 | 24.09 |
| CDX71720 | Canola | cytosol | 22.06 | 24.05 |
| CDY11374 | Canola | cytosol | 21.81 | 23.75 |
| AT3G61670.1 | Thale cress | nucleus | 23.17 | 23.67 |
| Os02t0258300-01 | Rice | nucleus | 24.66 | 23.63 |
| Bra007625.1-P | Field mustard | cytosol | 21.69 | 23.62 |
| AT4G01090.1 | Thale cress | nucleus | 20.57 | 23.25 |
| CDY11373 | Canola | cytosol | 20.57 | 22.65 |
| KRG97141 | Soybean | nucleus | 24.29 | 21.51 |
| KRH68892 | Soybean | nucleus | 23.92 | 21.35 |
| Os06t0524300-01 | Rice | nucleus | 21.31 | 21.21 |
| KRH06502 | Soybean | nucleus | 22.68 | 20.52 |
| KRH47938 | Soybean | nucleus | 22.06 | 19.91 |
| Solyc01g095590.2.1 | Tomato | nucleus | 23.17 | 19.34 |
| Solyc08g082040.2.1 | Tomato | nucleus | 22.06 | 18.84 |
| PGSC0003DMT400000290 | Potato | nucleus | 23.3 | 18.73 |
| PGSC0003DMT400032053 | Potato | nucleus | 21.93 | 18.71 |
| KRG99688 | Soybean | cytosol | 1.12 | 13.24 |
Protein Annotations
| EnsemblPlants:Os01t0621300-01 | EnsemblPlantsGene:Os01g0621300 | EntrezGene:4326628 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF6 |
| PFAM:PF11331 | ProteinID:BAS73211.1 | RefSeq:XP_015621223.1 | RefSeq:XP_015621224.1 | SEG:seg | UniParc:UPI0001C7E6F3 |
| UniProt:A0A0P0V5C3 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical conserved gene. (Os01t0621300-01)
Coordinates
chr1:-:24763107..24768254
Molecular Weight (calculated)
90313.3 Da
IEP (calculated)
5.518
GRAVY (calculated)
-0.952
Length
807 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSDLKEMKY RRRIGLDERA QCSEQRALDW HALKQDPVEL LRKLDELREQ ITRTCQIVEP PREHRRAGRR ALSLLPENPE PPPMPGYHRS RYGGGRYGHG
101: LPPSPYEPLR PEIGERYSRQ SSGRYRQYQG RQWDGCGVGH GNYNPSYTCS CPHCLHGQRT APQEEHIPMA RYFAGQHECY RFERSPSVSS DYDRRSVASS
201: LYSHRSVSKK RAEYFRKKAE HLCRPVYGAA PFVVCSSCYQ LLQVPMEKCM GRNRLQCGSC SQIVSLKREE KVIPFSPSAS FCVPKIEQGS NDQTRRDFEH
301: QLNEFANSAF YNLNEHSSMQ INIDFGDDHS VSSSISHDRT EKGCGSSRSI QLKTDGLLLS PSRSGDIESP KDILCERDAE CQVEPSDARV SPCSPVLEDK
401: LVDPLCSQEK DNNSEDLGMA NISDVNCKGE HKVNDDDDGS LSMGSEQKRK ECDEDSLVDE SMCKTHEQKS KDDHSSPEDV SKTHEFDSTK DNISSAVDGN
501: EKHEFESKKD DTNSLEGESL NKEHEQKSKE DENSGLEGEN VKKGFDKNNK ESENSALEDA NAPLEDTRNA SDAASLSEIS EEKKTEEENG SLDQPFVEDG
601: NAFAESGGSS FNERTNSGFS RGSSETALEE DQPSTGKSGD SSFFAGFLKK GFKDLSLFNQ SMDSVKVSIN GHPISERALK KAEKKAGPVE PGSYWYDYRA
701: GFWGVMGREC IGIIPPFIRE FNYPMASNCA SGDSGVFVNG RELHQRDLDL LVGRGLPRIS GKSYSVEISG NITDEETGKK LRSLGKLAPT IEKLKRGFGM
801: HVPEEFR
101: LPPSPYEPLR PEIGERYSRQ SSGRYRQYQG RQWDGCGVGH GNYNPSYTCS CPHCLHGQRT APQEEHIPMA RYFAGQHECY RFERSPSVSS DYDRRSVASS
201: LYSHRSVSKK RAEYFRKKAE HLCRPVYGAA PFVVCSSCYQ LLQVPMEKCM GRNRLQCGSC SQIVSLKREE KVIPFSPSAS FCVPKIEQGS NDQTRRDFEH
301: QLNEFANSAF YNLNEHSSMQ INIDFGDDHS VSSSISHDRT EKGCGSSRSI QLKTDGLLLS PSRSGDIESP KDILCERDAE CQVEPSDARV SPCSPVLEDK
401: LVDPLCSQEK DNNSEDLGMA NISDVNCKGE HKVNDDDDGS LSMGSEQKRK ECDEDSLVDE SMCKTHEQKS KDDHSSPEDV SKTHEFDSTK DNISSAVDGN
501: EKHEFESKKD DTNSLEGESL NKEHEQKSKE DENSGLEGEN VKKGFDKNNK ESENSALEDA NAPLEDTRNA SDAASLSEIS EEKKTEEENG SLDQPFVEDG
601: NAFAESGGSS FNERTNSGFS RGSSETALEE DQPSTGKSGD SSFFAGFLKK GFKDLSLFNQ SMDSVKVSIN GHPISERALK KAEKKAGPVE PGSYWYDYRA
701: GFWGVMGREC IGIIPPFIRE FNYPMASNCA SGDSGVFVNG RELHQRDLDL LVGRGLPRIS GKSYSVEISG NITDEETGKK LRSLGKLAPT IEKLKRGFGM
801: HVPEEFR
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.