Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044191_P004 | Maize | nucleus | 84.84 | 85.26 |
| Zm00001d011373_P002 | Maize | nucleus | 83.83 | 82.49 |
| HORVU3Hr1G055550.3 | Barley | nucleus | 65.66 | 66.08 |
| Os01t0621300-01 | Rice | nucleus | 66.79 | 66.05 |
| TraesCS3B01G253700.2 | Wheat | nucleus | 64.41 | 64.57 |
| TraesCS3D01G229400.1 | Wheat | nucleus | 64.04 | 64.12 |
| TraesCS3A01G224200.2 | Wheat | nucleus | 62.16 | 59.47 |
| KXG22639 | Sorghum | nucleus | 42.98 | 43.31 |
| Bra037384.1-P | Field mustard | nucleus | 11.9 | 41.48 |
| CDX79176 | Canola | cytosol | 5.14 | 36.28 |
| CDY48504 | Canola | nucleus | 19.3 | 27.35 |
| CDY15177 | Canola | nucleus | 18.92 | 27.11 |
| CDX90032 | Canola | nucleus | 18.8 | 26.79 |
| CDX91876 | Canola | nucleus | 19.17 | 26.2 |
| Bra033264.1-P | Field mustard | nucleus | 19.05 | 26.16 |
| CDY42041 | Canola | cytosol | 21.18 | 26.16 |
| CDX80013 | Canola | nucleus | 21.68 | 26.02 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 22.18 | 25.58 |
| Bra004541.1-P | Field mustard | nucleus | 21.43 | 25.48 |
| CDY67475 | Canola | nucleus | 18.8 | 25.38 |
| CDX71720 | Canola | cytosol | 23.31 | 25.14 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 26.44 | 24.85 |
| CDY07174 | Canola | nucleus | 19.8 | 24.84 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 24.31 | 24.84 |
| Bra000943.1-P | Field mustard | nucleus | 18.67 | 24.83 |
| CDY11374 | Canola | cytosol | 22.93 | 24.7 |
| AT2G46380.1 | Thale cress | nucleus | 23.43 | 24.35 |
| Bra007625.1-P | Field mustard | cytosol | 22.56 | 24.29 |
| AT3G61670.1 | Thale cress | nucleus | 23.81 | 24.05 |
| CDY11373 | Canola | cytosol | 21.93 | 23.87 |
| AT1G01440.1 | Thale cress | nucleus | 19.3 | 23.19 |
| EER88427 | Sorghum | nucleus | 22.68 | 22.74 |
| KXG29961 | Sorghum | nucleus | 24.44 | 22.57 |
| AT4G01090.1 | Thale cress | nucleus | 19.92 | 22.27 |
| KRG97141 | Soybean | nucleus | 23.68 | 20.75 |
| KRH68892 | Soybean | nucleus | 23.31 | 20.58 |
| KRH06502 | Soybean | nucleus | 22.56 | 20.18 |
| KRH47938 | Soybean | nucleus | 22.06 | 19.69 |
| Solyc01g095590.2.1 | Tomato | nucleus | 23.18 | 19.13 |
| Solyc08g082040.2.1 | Tomato | nucleus | 22.43 | 18.94 |
| PGSC0003DMT400032053 | Potato | nucleus | 22.31 | 18.82 |
| PGSC0003DMT400000290 | Potato | nucleus | 23.06 | 18.33 |
| KRG99688 | Soybean | cytosol | 1.0 | 11.76 |
Protein Annotations
| EnsemblPlants:EES03295 | EnsemblPlantsGene:SORBI_3003G223900 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF6 | PFAM:PF11331 |
| ProteinID:EES03295 | ProteinID:EES03295.2 | SEG:seg | UniParc:UPI00081ABED5 | UniProt:C5XR49 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr3:-:55990681..55995854
Molecular Weight (calculated)
89267.4 Da
IEP (calculated)
5.844
GRAVY (calculated)
-0.962
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSDLKEMKY RRRIGVEERP QCSDPRGGGA DWPALQQDPV ELLRKLDELR DQITRSCNVV GQPREHRRVS RRAVSMLPEQ LEPPPLPAYH RSRYGGRYGH
101: GLPPPSPYAP PRPEHGERYV RQSSGHYRQY PATGRQSENG GMGPGGYHHY GCACPHCLHG QRPLQQEENI PMARYFAGQH ESYRFQRSPS VSSDYDRRSV
201: ASSLYSHRSV SKRRAEYFRK KAEHICRPVD GAAPFSVCSS CYKLLQMPMG KCIGRKQNRF QCGSCCQIIS LKHEEENGIP FVPSSSLYAP EMEQCSSDQM
301: RRDSAHQRHE DFNSMFYNSI DHSNMQNNMD FTDDNSLSST MSNDRIEKEC GSTRSIQSKA EGLSFSPSRS VDIGSPKDIL CEREADCKVE PSVDGPLGPR
401: SPALEDKLVD PLCAQENGND EDDQGMPYRS DLTCKGEYDV SDEYDVGIST RSKQESNEDD KDATEDERSY RSYEQKSKSK EDDCCNVEDS SKTYRQNSGE
501: DDASSLVDGS EKYECMNIKD DDSSPGGEDT WNKYEPKVKG DENCVLGAES IHNNCDENNK DFIGTGSISL RHEELKIEED NGKLQQPFIE DANSQAGSGS
601: SINERTNSGF SRGSSETGLD EDQSSTGKSG DSSFFAGFLK KGFKDLSLLN KSMDSVKVSI NGHPISERAL KKAEKKAGPV DPGSYWYDYR AGFWGVMGRE
701: CIGIVPPFIR EFNYPMARDC AGGDTGVFVN GRELHQRDLD LLVGRGLPRI SGKSYSIEMS GNVIDEATGK KLRSLGKLAP TIEKLKRGFG MHVPEEFR
101: GLPPPSPYAP PRPEHGERYV RQSSGHYRQY PATGRQSENG GMGPGGYHHY GCACPHCLHG QRPLQQEENI PMARYFAGQH ESYRFQRSPS VSSDYDRRSV
201: ASSLYSHRSV SKRRAEYFRK KAEHICRPVD GAAPFSVCSS CYKLLQMPMG KCIGRKQNRF QCGSCCQIIS LKHEEENGIP FVPSSSLYAP EMEQCSSDQM
301: RRDSAHQRHE DFNSMFYNSI DHSNMQNNMD FTDDNSLSST MSNDRIEKEC GSTRSIQSKA EGLSFSPSRS VDIGSPKDIL CEREADCKVE PSVDGPLGPR
401: SPALEDKLVD PLCAQENGND EDDQGMPYRS DLTCKGEYDV SDEYDVGIST RSKQESNEDD KDATEDERSY RSYEQKSKSK EDDCCNVEDS SKTYRQNSGE
501: DDASSLVDGS EKYECMNIKD DDSSPGGEDT WNKYEPKVKG DENCVLGAES IHNNCDENNK DFIGTGSISL RHEELKIEED NGKLQQPFIE DANSQAGSGS
601: SINERTNSGF SRGSSETGLD EDQSSTGKSG DSSFFAGFLK KGFKDLSLLN KSMDSVKVSI NGHPISERAL KKAEKKAGPV DPGSYWYDYR AGFWGVMGRE
701: CIGIVPPFIR EFNYPMARDC AGGDTGVFVN GRELHQRDLD LLVGRGLPRI SGKSYSIEMS GNVIDEATGK KLRSLGKLAP TIEKLKRGFG MHVPEEFR
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.