Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d042017_P002 | Maize | plastid | 90.64 | 92.81 |
Os01t0963400-01 | Rice | cytosol | 62.57 | 87.7 |
HORVU7Hr1G010470.2 | Barley | cytosol | 33.33 | 77.03 |
HORVU2Hr1G087710.1 | Barley | cytosol | 34.5 | 71.95 |
TraesCS3B01G577800.1 | Wheat | plastid | 67.25 | 70.12 |
TraesCS3A01G509000.1 | Wheat | plastid | 66.67 | 69.09 |
CDY14949 | Canola | cytosol | 46.2 | 68.7 |
TraesCS3D01G516800.1 | Wheat | plastid | 66.08 | 68.48 |
GSMUA_Achr1P13230_001 | Banana | extracellular | 46.78 | 59.26 |
VIT_18s0072g00400.t01 | Wine grape | plastid | 59.65 | 58.29 |
GSMUA_Achr6P25720_001 | Banana | plastid | 57.89 | 58.24 |
KRH35133 | Soybean | plastid | 55.56 | 54.29 |
KRG91663 | Soybean | plastid | 55.56 | 54.29 |
HORVU3Hr1G111930.2 | Barley | plastid | 65.5 | 54.11 |
PGSC0003DMT400061915 | Potato | cytosol, plastid | 53.22 | 53.53 |
AT1G43560.1 | Thale cress | plastid | 52.05 | 53.29 |
HORVU5Hr1G116290.1 | Barley | plastid | 42.69 | 52.52 |
AT1G76760.1 | Thale cress | plastid | 52.63 | 52.33 |
Solyc04g071560.2.1 | Tomato | plastid | 53.22 | 52.3 |
Bra015721.1-P | Field mustard | plastid | 51.46 | 51.16 |
CDX88314 | Canola | plastid | 50.88 | 50.58 |
CDX87569 | Canola | plastid | 50.88 | 50.58 |
KXG20981 | Sorghum | plastid | 25.73 | 25.14 |
EES11645 | Sorghum | plastid | 25.73 | 25.14 |
EES07212 | Sorghum | plastid | 23.98 | 23.56 |
EES16784 | Sorghum | plastid | 24.56 | 22.95 |
EES12176 | Sorghum | plastid | 24.56 | 21.99 |
EES12552 | Sorghum | plastid | 22.81 | 20.97 |
Protein Annotations
MapMan:10.5.8 | Gene3D:3.40.30.10 | EntrezGene:8074115 | UniProt:C5XIP9 | EnsemblPlants:EES02107 | ProteinID:EES02107 |
ProteinID:EES02107.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 |
GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | ProteinID:KXG34185.1 | ProteinID:OQU88234.1 |
PFAM:PF00085 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF280 |
EnsemblPlantsGene:SORBI_3003G437600 | SUPFAM:SSF52833 | TIGRFAMs:TIGR01068 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
InterPro:Thioredoxin_domain | UniParc:UPI0001A84C3C | RefSeq:XP_002456987.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:+:73796904..73808113
Molecular Weight (calculated)
18747.8 Da
IEP (calculated)
9.253
GRAVY (calculated)
-0.116
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFATGSAT ARAALASPTP CRPAALASRP APALWMPLRC STPALGLRGG SARSRRGATL RVEAKKQTFS SFDELLEKSE KPLLVDFYAT WCGPCQYMVP
101: ILEEVSEKLG DKIQVVKIDT EKYTSIASRY RIEALPTFII FKDGKPCYRF EGALPANQMI EQIENALAVT K
101: ILEEVSEKLG DKIQVVKIDT EKYTSIASRY RIEALPTFII FKDGKPCYRF EGALPANQMI EQIENALAVT K
001: MASISLSSST VPSLNSKESS GVSAFASRSI SAVKFQFPVR RVRTGDLKFP SLSSTTRCTP RRIEAKKQTF DSFEDLLVNS DKPVLVDYYA TWCGPCQFMV
101: PILNEVSETL KDKIQVVKID TEKYPSIANK YKIEALPTFI LFKDGEPCDR FEGALTAKQL IQRIEDSLKV KP
101: PILNEVSETL KDKIQVVKID TEKYPSIANK YKIEALPTFI LFKDGEPCDR FEGALTAKQL IQRIEDSLKV KP
Arabidopsis Description
ATY1TY1 [Source:UniProtKB/TrEMBL;Acc:A0A178WE50]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.