CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU78269

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52930.1	OQU78269	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042453_P001	Maize	plasma membrane	98.31	98.31
Zm00001d012103_P001	Maize	extracellular, plasma membrane	97.75	97.75
EES06798	Sorghum	cytosol	95.21	94.41
Os10t0163340-01	Rice	cytosol, extracellular, plasma membrane, plastid	92.39	91.62
TraesCS3B01G422900.1	Wheat	cytosol	86.76	89.8
TraesCS3A01G391500.1	Wheat	cytosol, golgi, unclear	90.42	89.66
Os05t0402700-01	Rice	extracellular	83.94	89.49
TraesCS3D01G384000.1	Wheat	cytosol, golgi	90.14	89.39
Os01t0905800-01	Rice	cytosol, extracellular	89.86	89.11
TraesCS3D01G383700.1	Wheat	golgi	89.86	89.11
TraesCS3B01G423200.1	Wheat	cytosol	89.86	89.11
TraesCS3A01G391100.1	Wheat	golgi	89.58	88.83
GSMUA_Achr5P25490_001	Banana	cytosol	81.13	87.54
GSMUA_Achr8P08990_001	Banana	cytosol	81.69	87.09
TraesCS3D01G384100.2	Wheat	cytosol	87.61	84.97
VIT_08s0007g03830.t01	Wine grape	cytosol, extracellular	85.63	84.92
GSMUA_Achr8P01230_001	Banana	cytosol	75.77	84.86
HORVU3Hr1G088570.1	Barley	mitochondrion, plasma membrane	89.86	84.17
Solyc10g083570.1.1	Tomato	extracellular	84.51	83.8
Solyc09g009260.2.1	Tomato	extracellular, nucleus, plastid	83.94	83.24
PGSC0003DMT400072632	Potato	cytosol	83.94	83.24
HORVU3Hr1G088540.1	Barley	cytosol, mitochondrion, plastid	90.42	82.95
PGSC0003DMT400006894	Potato	cytosol	83.38	82.68
KRH67855	Soybean	endoplasmic reticulum	83.1	82.4
HORVU3Hr1G088500.2	Barley	cytosol	51.83	82.14
AT3G52930.1	Thale cress	cytosol	81.97	81.28
AT2G36460.1	Thale cress	cytosol	81.97	81.28
Bra028543.1-P	Field mustard	cytosol	81.13	80.45
KRH16972	Soybean	nucleus	81.13	80.45
GSMUA_Achr8P07620_001	Banana	mitochondrion, plastid	82.54	80.27
Bra009517.1-P	Field mustard	cytosol	80.85	79.94
KRH72603	Soybean	nucleus	80.56	79.89
KRH20036	Soybean	cytosol, mitochondrion, nucleus	80.28	79.61
KRH32664	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	80.0	79.33
Bra019639.1-P	Field mustard	cytosol	79.72	79.05
Bra006960.1-P	Field mustard	cytosol	81.13	76.19
Bra017234.1-P	Field mustard	cytosol	72.96	75.51
EER88632	Sorghum	cytosol	74.65	74.02
AT5G03690.1	Thale cress	mitochondrion	81.13	73.28
TraesCS5A01G009400.1	Wheat	cytosol	50.14	70.08
EES09371	Sorghum	plastid	57.18	52.32
KXG32068	Sorghum	plastid	56.34	51.68
EES16731	Sorghum	plastid	55.77	50.9
Bra017233.1-P	Field mustard	nucleus, plastid	81.41	21.84

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	EntrezGene:8078696	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	UniProt:C5XFH6
EnsemblPlants:EES04064	ProteinID:EES04064	ProteinID:EES04064.1	InterPro:FBA_I	GO:GO:0003674	GO:GO:0003824
GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829	InterPro:IPR013785
PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF38	MetaCyc:PWY-1042	MetaCyc:PWY-1861
MetaCyc:PWY-5484	MetaCyc:PWY-6142	MetaCyc:PWY-7385	EnsemblPlantsGene:SORBI_3003G393900	SUPFAM:SSF51569	unigene:Sbi.18047
UniParc:UPI0001A854C4	RefSeq:XP_002458944.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:70485858..70488491

Molecular Weight (calculated)

38560.2 Da

IEP (calculated)

7.359

GRAVY (calculated)

-0.215

Length

355 amino acids

Sequence
(BLAST)

001: MSAYCGKYKD ELIKNAAYIG TPGKGILAAD ESTGTIGKRL SSINVENVEE NRRALRELLF CCPGALQYIS GVILFEETLY QKTKDGKPFV DVLKEGGVLP
101: GIKVDKGTIE VAGTDKETTT QGHDDLGKRC AKYYEAGARF AKWRAVLKIG PNEPSQLAID LNAQGLARYA IICQENGLVP IVEPEILVDG PHDIDRCAYV
201: TEVVLAACYK ALNEHHVLLE GTLLKPNMVT PGSDSKKVTP ELIAEYTVRT LQRTVPAAVP AVVFLSGGQS EEEATLNLNA MNKLNTKKPW SLSFSFGRAL
301: QASTLKAWAG KVENIEKARA AFLARCKANS EATLGTYKGD AAADTESLHV KDYKY

Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)

001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY

Arabidopsis Description

FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.