Factsheet for Zm00001d042453_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 16377746
plasma membrane: 18521681
extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23353019
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 16377746 doi

J Zhu, S Chen, S Alvarez, VS Asirvatham, DP Schachtman, Y Wu, RE Sharp

Division of Plant Sciences, University of Missouri, Columbia, Missouri 65211, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 18521681 doi

P Carletti, A Masi, B Spolaore, P Polverino De Laureto, M De Zorzi, L Turetta, M Ferretti, S Nardi

Department of Agricultural Biotechnology, University of Padua, Agripolis, Strada Romea, 16-35020 Legnaro, Padova, Italy.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d038652_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52930.1	Zm00001d038652_P003	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012103_P001	Maize	extracellular, plasma membrane	98.59	98.59
EES04064	Sorghum	cytosol	98.31	98.31
Os10t0163340-01	Rice	cytosol, extracellular, plasma membrane, plastid	92.11	91.34
TraesCS3B01G422900.1	Wheat	cytosol	86.48	89.5
TraesCS3A01G391500.1	Wheat	cytosol, golgi, unclear	90.14	89.39
Os05t0402700-01	Rice	extracellular	83.66	89.19
TraesCS3D01G384000.1	Wheat	cytosol, golgi	89.58	88.83
Os01t0905800-01	Rice	cytosol, extracellular	89.58	88.83
TraesCS3B01G423200.1	Wheat	cytosol	89.58	88.83
TraesCS3D01G383700.1	Wheat	golgi	89.58	88.83
TraesCS3A01G391100.1	Wheat	golgi	89.3	88.55
GSMUA_Achr5P25490_001	Banana	cytosol	81.13	87.54
GSMUA_Achr8P08990_001	Banana	cytosol	81.13	86.49
VIT_08s0007g03830.t01	Wine grape	cytosol, extracellular	85.63	84.92
TraesCS3D01G384100.2	Wheat	cytosol	87.32	84.7
GSMUA_Achr8P01230_001	Banana	cytosol	75.49	84.54
Solyc10g083570.1.1	Tomato	extracellular	84.79	84.08
HORVU3Hr1G088570.1	Barley	mitochondrion, plasma membrane	89.58	83.91
Solyc09g009260.2.1	Tomato	extracellular, nucleus, plastid	84.23	83.52
PGSC0003DMT400072632	Potato	cytosol	84.23	83.52
PGSC0003DMT400006894	Potato	cytosol	83.66	82.96
HORVU3Hr1G088540.1	Barley	cytosol, mitochondrion, plastid	90.14	82.69
KRH67855	Soybean	endoplasmic reticulum	82.54	81.84
HORVU3Hr1G088500.2	Barley	cytosol	51.55	81.7
AT3G52930.1	Thale cress	cytosol	82.25	81.56
AT2G36460.1	Thale cress	cytosol	82.25	81.56
Bra028543.1-P	Field mustard	cytosol	81.13	80.45
KRH16972	Soybean	nucleus	80.85	80.17
GSMUA_Achr8P07620_001	Banana	mitochondrion, plastid	82.25	80.0
Bra009517.1-P	Field mustard	cytosol	80.85	79.94
KRH72603	Soybean	nucleus	80.28	79.61
KRH20036	Soybean	cytosol, mitochondrion, nucleus	80.0	79.33
KRH32664	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	79.72	79.05
Bra019639.1-P	Field mustard	cytosol	79.72	79.05
Bra006960.1-P	Field mustard	cytosol	81.13	76.19
Bra017234.1-P	Field mustard	cytosol	73.24	75.8
AT5G03690.1	Thale cress	mitochondrion	81.13	73.28
TraesCS5A01G009400.1	Wheat	cytosol	49.86	69.69
Zm00001d003968_P001	Maize	cytosol, nucleus, plastid	22.82	54.0
Zm00001d028395_P001	Maize	cytosol, nucleus, plastid	22.82	54.0
Zm00001d053015_P001	Maize	plastid	57.18	51.52
Zm00001d040084_P001	Maize	plastid	56.06	51.42
Zm00001d023559_P001	Maize	plastid	54.65	50.0
Zm00001d051622_P001	Maize	cytosol	9.01	47.76
Zm00001d008491_P001	Maize	plastid	55.77	47.6
Zm00001d046553_P003	Maize	cytosol	72.11	38.61
Bra017233.1-P	Field mustard	nucleus, plastid	81.97	22.0

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	EntrezGene:542261	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	UniProt:B4FAL9
EMBL:BT034157	EMBL:BT040902	InterPro:FBA_I	GO:GO:0003674	GO:GO:0003824	GO:GO:0004332
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005975
GO:GO:0005986	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009628	GO:GO:0009987	GO:GO:0016829
GO:GO:0034059	InterPro:IPR013785	ProteinID:ONM35414.1	PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627
PANTHER:PTHR11627:SF38	SUPFAM:SSF51569	UniParc:UPI00017B626A	EnsemblPlantsGene:Zm00001d042453	EnsemblPlants:Zm00001d042453_P001	EnsemblPlants:Zm00001d042453_T001

Description

aldolase1 aldolase1

Coordinates

chr3:+:168340504..168343022

Molecular Weight (calculated)

38592.2 Da

IEP (calculated)

7.706

GRAVY (calculated)

-0.239

Length

355 amino acids

Sequence
(BLAST)

001: MSAYCGKYKD ELIKNAAYIG TPGKGILAAD ESTGTIGKRL SSINVENVEE NRRALRELLF CCPGALQYIS GVILFEETLY QKTKDGKPFV DVLKEGGVLP
101: GIKVDKGTIE VVGTDKETTT QGHDDLGKRC AKYYEAGARF AKWRAVLKIG PNEPSQLAID LNAQGLARYA IICQENGLVP IVEPEILVDG PHDIDRCAYV
201: TETVLAACYK ALNEHHVLLE GTLLKPNMVT PGSDSKKVTP EVIAEYTVRT LQRTVPAAVP AVVFLSGGQS EEEATRNLNA MNKLSTKKPW SLSFSFGRAL
301: QASTLKAWAG KVENLEKARA AFLARCKANS EATLGTYKGD AAADTESLHV KDYKY

Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)

001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY

Arabidopsis Description

FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.