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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 cytosol: 22729884
golgi: 25769308
gfp PMID: 22729884 doi
MJ Hong, DY Kim, SY Kang, DS Kim, JB Kim, YW Seo
Division of Biotechnology, Korea University, Anam-Dong, Seongbuk-Gu, Seoul 136-701, Republic of Korea.
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G325600.1
TraesCS1B01G338800.1
TraesCS1B01G339000.1
TraesCS1D01G327500.1
TraesCS7A01G562100.1
TraesCS7D01G001000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G52930.1 TraesCS1A01G325600.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS1B01G338800.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS1B01G339000.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS1D01G327500.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS7A01G562100.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS7D01G001000.1 AT5G42980.1 15352244
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G391500.1 Wheat cytosol, golgi, unclear 99.16 99.16
TraesCS3B01G422900.1 Wheat cytosol 93.58 97.67
TraesCS3D01G384100.2 Wheat cytosol 97.21 95.08
HORVU3Hr1G088570.1 Barley mitochondrion, plasma membrane 98.88 93.4
Os10t0163340-01 Rice cytosol, extracellular, plasma membrane, plastid 90.5 90.5
EES06798 Sorghum cytosol 90.5 90.5
EES04064 Sorghum cytosol 89.11 89.86
Zm00001d042453_P001 Maize plasma membrane 88.83 89.58
Os01t0905800-01 Rice cytosol, extracellular 89.39 89.39
Zm00001d012103_P001 Maize extracellular, plasma membrane 88.55 89.3
GSMUA_Achr5P25490_001 Banana cytosol 81.01 88.15
VIT_08s0007g03830.t01 Wine grape cytosol, extracellular 87.99 87.99
GSMUA_Achr8P08990_001 Banana cytosol 81.28 87.39
Os05t0402700-01 Rice extracellular 80.73 86.79
Solyc10g083570.1.1 Tomato extracellular 84.92 84.92
PGSC0003DMT400072632 Potato cytosol 84.64 84.64
KRH67855 Soybean endoplasmic reticulum 84.08 84.08
GSMUA_Achr8P01230_001 Banana cytosol 74.3 83.91
AT2G36460.1 Thale cress cytosol 83.8 83.8
Solyc09g009260.2.1 Tomato extracellular, nucleus, plastid 83.8 83.8
AT3G52930.1 Thale cress cytosol 83.24 83.24
Bra028543.1-P Field mustard cytosol 83.24 83.24
PGSC0003DMT400006894 Potato cytosol 83.24 83.24
KRH20036 Soybean cytosol, mitochondrion, nucleus 82.96 82.96
Bra019639.1-P Field mustard cytosol 82.12 82.12
KRH16972 Soybean nucleus 82.12 82.12
KRH32664 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 82.12 82.12
Bra009517.1-P Field mustard cytosol 82.12 81.89
KRH72603 Soybean nucleus 81.56 81.56
GSMUA_Achr8P07620_001 Banana mitochondrion, plastid 82.96 81.37
Bra006960.1-P Field mustard cytosol 83.24 78.84
TraesCS7B01G283000.1 Wheat cytosol 77.09 76.67
Bra017234.1-P Field mustard cytosol 72.91 76.09
AT5G03690.1 Thale cress mitochondrion 81.84 74.55
TraesCS3B01G025200.1 Wheat plastid 55.87 52.22
TraesCS5B01G115300.1 Wheat golgi 55.03 51.17
TraesCS4B01G109900.1 Wheat plastid 54.19 50.0
Bra017233.1-P Field mustard nucleus, plastid 82.96 22.45
Protein Annotations
KEGG:00010+4.1.2.13KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13KEGG:00710+4.1.2.13MapMan:2.1.1.2
MapMan:3.1.2.2Gene3D:3.20.20.70InterPro:Aldolase_I_ASInterPro:Aldolase_TIMInterPro:FBA_IGO:GO:0003674
GO:GO:0003824GO:GO:0004332GO:GO:0005975GO:GO:0006091GO:GO:0006096GO:GO:0006139
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987InterPro:IPR013785
PFAM:PF00274ScanProsite:PS00158PANTHER:PTHR11627PANTHER:PTHR11627:SF38SUPFAM:SSF51569EnsemblPlantsGene:TraesCS3B01G423200
EnsemblPlants:TraesCS3B01G423200.1TIGR:cd00948::::
Description
No Description!
Coordinates
chr3B:+:660698526..660701291
Molecular Weight (calculated)
38897.6 Da
IEP (calculated)
7.269
GRAVY (calculated)
-0.241
Length
358 amino acids
Sequence
(BLAST)
001: MSAYCGKYKD ELIKNAAYIG TPGKGILAAD ESTGTIGKRF ASINVENVED NRRALRELLF CTPGALQYLS GVILFEETLY QSTKGGKPFV DILKEGNVLP
101: GIKVDKGTVE LAGTNGETTT QGFDDLGKRC AKYYEAGARF AKWRAVLKIG LTEPSQLSID QNAQGLARYA IICQENGLVP IVEPEILVDG PHDIDRCAYV
201: TEMVLAACYK ALNDQHVLLE GTLLKPNMVT PGSDAKKVAP EVIAEYTVRT LQRTVPAAVP AIVFLSGGQS EEEATLNLNA MNKLQTKKPW NLSFSFGRAL
301: QQSTLKAWAG KAENEEKARK AFLVRCKANS EATLGTYKGD ATLGEGASES LHVKDYKY
Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)
001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY
Arabidopsis Description
FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.