Factsheet for Bra017233.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G36460.1	Thale cress	cytosol	25.25	93.3
Bra028543.1-P	Field mustard	cytosol	24.41	90.22
Bra019639.1-P	Field mustard	cytosol	24.04	88.83
Bra017234.1-P	Field mustard	cytosol	22.75	87.76
VIT_08s0007g03830.t01	Wine grape	cytosol, extracellular	23.58	87.15
Bra009517.1-P	Field mustard	cytosol	23.05	84.96
Bra006960.1-P	Field mustard	cytosol	24.26	84.92
KRH16972	Soybean	nucleus	22.9	84.64
Solyc09g009260.2.1	Tomato	extracellular, nucleus, plastid	22.9	84.64
PGSC0003DMT400006894	Potato	cytosol	22.83	84.36
PGSC0003DMT400072632	Potato	cytosol	22.75	84.08
Solyc10g083570.1.1	Tomato	extracellular	22.75	84.08
KRH72603	Soybean	nucleus	22.75	84.08
TraesCS3A01G391500.1	Wheat	cytosol, golgi, unclear	22.52	83.24
TraesCS3B01G423200.1	Wheat	cytosol	22.45	82.96
TraesCS3B01G422900.1	Wheat	cytosol	21.47	82.8
Os01t0905800-01	Rice	cytosol, extracellular	22.37	82.68
TraesCS3D01G384000.1	Wheat	cytosol, golgi	22.3	82.4
EES06798	Sorghum	cytosol	22.3	82.4
TraesCS3A01G391100.1	Wheat	golgi	22.3	82.4
TraesCS3D01G383700.1	Wheat	golgi	22.22	82.12
Zm00001d042453_P001	Maize	plasma membrane	22.0	81.97
Zm00001d012103_P001	Maize	extracellular, plasma membrane	21.92	81.69
GSMUA_Achr11P...	Banana	cytosol	8.09	81.68
EES04064	Sorghum	cytosol	21.84	81.41
TraesCS3D01G384100.2	Wheat	cytosol	22.45	81.15
Os10t0163340-01	Rice	cytosol, extracellular, plasma membrane, plastid	21.69	80.17
HORVU3Hr1G088570.1	Barley	mitochondrion, plasma membrane	22.9	79.95
GSMUA_Achr11P...	Banana	cytosol	11.56	78.87
Os08t0120600-01	Rice	cytosol, plasma membrane, plastid	21.39	78.18
HORVU3Hr1G088540.1	Barley	cytosol, mitochondrion, plastid	22.75	77.78
Os05t0402700-01	Rice	extracellular	19.27	76.58
HORVU3Hr1G088500.2	Barley	cytosol	12.77	75.45
TraesCS5A01G009400.1	Wheat	cytosol	13.38	69.69
Bra014340.1-P	Field mustard	plastid	15.27	51.93
Bra010717.1-P	Field mustard	plastid	15.19	51.15
Bra031181.1-P	Field mustard	plastid	15.34	50.75
Bra033589.1-P	Field mustard	plastid	15.04	50.64
Bra030303.1-P	Field mustard	plastid	14.89	50.51
Bra011884.1-P	Field mustard	plastid	15.42	49.88
Bra033590.1-P	Field mustard	plastid	3.1	35.04

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	Gene3D:1.25.40.90
MapMan:16.2.1.5.2	MapMan:2.1.1.2	MapMan:3.1.2.2	InterPro:Aldolase_I_AS	EnsemblPlantsGene:Bra017233	EnsemblPlants:Bra017233.1
EnsemblPlants:Bra017233.1-P	InterPro:CID_dom	InterPro:ENTH_VHS	InterPro:FBA_I	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0004332	GO:GO:0005488	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016829	InterPro:IPR006569	InterPro:IPR008942	InterPro:IPR013087	UniProt:M4DL52	PFAM:PF00274
PFAM:PF04818	ScanProsite:PS00028	ScanProsite:PS00158	PFscan:PS50157	PFscan:PS51391	PANTHER:PTHR15921
PANTHER:PTHR15921:SF5	InterPro:RNA_pol_II-bd	SMART:SM00582	SUPFAM:SSF48464	SUPFAM:SSF51569	UniParc:UPI0002544241
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

AT2G36480 (E=8e-178) | zinc finger (C2H2-type) family protein

Coordinates

chrA04:-:15858430..15866343

Molecular Weight (calculated)

144278.0 Da

IEP (calculated)

7.547

GRAVY (calculated)

-0.532

Length

1323 amino acids

Sequence
(BLAST)

0001: MENSRRPFDR SRDPGPMKKP RLSDVNSNAR QLTSQRTIGT ASSSRFRAAG GRELESDPNG EAYQPQPVHP HYELVNQYKS ALSELTINSK PIITNLTIIA
0101: GENVHAAKAV VATVCNNILE VPSDQKLPTL YLLDSIVKNI GRDYIKYFAA KLPEVFVKAY RQVDPPMRSN MRHLFGTWKG VFHPNTLQQI EKELGFNAKS
0201: DGSAAVSSTG RADLQSQRPP NSIHVNPKYL ERQRLQQSGR AKGMVTDVPE IASNLARDSD RLERVSSIAS GGSWAGPAKV NTIRRPQRDS LSEPLYERDM
0301: ESISGEYDYT SELPHNSRPV IKKVNARVTD DGCEKQWYET VSRGPDLISD QRDVLHTKSR LSNYATARLE NLESSGPSRN TGVPYDSWKN SEEEEFMWDM
0401: HSRLSETDVA TVNPKNELHT PEESERLESD NHLLKRPRLS ALDPRFDPTS TNSYSSEQKD GSVYGRLSST SNAARKGIQP QSKVSDRHSP LRDSTFKQNV
0501: TKQDSRRTHS LTQRDPRASR FPAKSQSVLR DDFVRPQLKK SNAIDLPDSF QGEKFDSKSA GLTIASEATG QRNMSDLLEA VMKSGILSNN LTNGAMKEES
0601: SQVNPRALTV SAASKPKASP NSVAAKKISA RLKLERSSAP LGSDPVSLTG VTSAQTSKES SKAPDPISSL LSSLVSKGLI SASKMELPSL VQCAAAPFIS
0701: QDHSPDHSTN SSTSISVVPS DAQSLVVVEK GPSTAPKVAP AETAVSEPEN LIGLKFRADK IRKLHPSVIS SLFDDFPHLC TSCGVRLKEK EELDRHMELH
0801: DKKKLELSGT NSKCRVWFPK ADDWVAAKAG ELEPEYDEIL SEPESEDGPA VAADENQCAC ILCGEMFEDC FSQGTGQWLF KGASYLTIPP SNSEANGPIV
0901: HAGCLTKSSL PSLGIGNAIK QTMASFTSKY ADELIANAAY IGTPGKGILA ADESTGTIGK RLSSINVENV ESNRRALREL LFTTPGALPC LSGVILFEET
1001: LYQKSSKDAD AAADAAAYYF ATADFIDVSR RIRRSDAASD AASCVNETNK RTPFVDILKE GGVLPGIKVD KGTVSLPGTN GETTTQGLDG LGERCKKYYE
1101: AGARFAKWRA VLKIGPTEPS ELAIRENAYG LARYAAICQE NGLVPIVEPE ILVDGSHDIQ KCAEVTERVL AACYKALSDH HVMLEGTLLK PNMVTPGSES
1201: GKVAPEVVAE YTVRALQRTV PAAVPAVVFL SGGQSEEEAT RNLNAMNQLK TKKPWSLSFS FGRALQQSTL KTWGGKEENV KKAQEAFLVR CKANSEATLG
1301: VYKGDAQLGE GAAESLHVKD YKY

Best Arabidopsis Sequence Match ( AT2G36480.1 )
(BLAST)

001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE

Arabidopsis Description

ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.