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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G325600.1
TraesCS1B01G338800.1
TraesCS1B01G339000.1
TraesCS1D01G327500.1
TraesCS7A01G562100.1
TraesCS7D01G001000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G52930.1 TraesCS1A01G325600.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS1B01G338800.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS1B01G339000.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS1D01G327500.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS7A01G562100.1 AT5G42980.1 15352244
AT3G52930.1 TraesCS7D01G001000.1 AT5G42980.1 15352244
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G422900.1 Wheat cytosol 95.25 99.42
TraesCS3D01G383700.1 Wheat golgi 99.16 99.16
TraesCS3A01G391100.1 Wheat golgi 98.6 98.6
TraesCS3D01G384100.2 Wheat cytosol 94.69 92.62
HORVU3Hr1G088540.1 Barley cytosol, mitochondrion, plastid 98.32 90.96
Os10t0163340-01 Rice cytosol, extracellular, plasma membrane, plastid 90.22 90.22
EES04064 Sorghum cytosol 89.39 90.14
EES06798 Sorghum cytosol 89.94 89.94
Zm00001d042453_P001 Maize plasma membrane 88.83 89.58
Zm00001d012103_P001 Maize extracellular, plasma membrane 88.55 89.3
HORVU3Hr1G088500.2 Barley cytosol 55.59 88.84
Os01t0905800-01 Rice cytosol, extracellular 88.55 88.55
GSMUA_Achr5P25490_001 Banana cytosol 80.17 87.23
VIT_08s0007g03830.t01 Wine grape cytosol, extracellular 87.15 87.15
GSMUA_Achr8P08990_001 Banana cytosol 81.01 87.09
Os05t0402700-01 Rice extracellular 80.45 86.49
Solyc10g083570.1.1 Tomato extracellular 84.36 84.36
PGSC0003DMT400072632 Potato cytosol 84.08 84.08
KRH67855 Soybean endoplasmic reticulum 84.08 84.08
Solyc09g009260.2.1 Tomato extracellular, nucleus, plastid 83.8 83.8
GSMUA_Achr8P01230_001 Banana cytosol 74.02 83.6
AT2G36460.1 Thale cress cytosol 83.52 83.52
PGSC0003DMT400006894 Potato cytosol 83.24 83.24
Bra028543.1-P Field mustard cytosol 82.68 82.68
AT3G52930.1 Thale cress cytosol 82.4 82.4
KRH16972 Soybean nucleus 82.4 82.4
KRH20036 Soybean cytosol, mitochondrion, nucleus 82.12 82.12
KRH32664 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 81.84 81.84
KRH72603 Soybean nucleus 81.56 81.56
Bra009517.1-P Field mustard cytosol 81.56 81.34
Bra019639.1-P Field mustard cytosol 81.28 81.28
GSMUA_Achr8P07620_001 Banana mitochondrion, plastid 82.12 80.55
TraesCS5A01G009400.1 Wheat cytosol 56.15 79.13
Bra006960.1-P Field mustard cytosol 82.4 78.04
TraesCS7D01G377400.1 Wheat cytosol, golgi 76.82 76.39
Bra017234.1-P Field mustard cytosol 72.63 75.8
AT5G03690.1 Thale cress mitochondrion 81.01 73.79
TraesCS3D01G026400.1 Wheat plastid 55.31 51.16
TraesCS5D01G122700.1 Wheat plastid 54.19 50.39
TraesCS4D01G107400.1 Wheat plastid 53.91 49.74
Bra017233.1-P Field mustard nucleus, plastid 82.4 22.3
Protein Annotations
KEGG:00010+4.1.2.13KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13KEGG:00710+4.1.2.13MapMan:2.1.1.2
MapMan:3.1.2.2Gene3D:3.20.20.70InterPro:Aldolase_I_ASInterPro:Aldolase_TIMInterPro:FBA_IGO:GO:0003674
GO:GO:0003824GO:GO:0004332GO:GO:0005975GO:GO:0006091GO:GO:0006096GO:GO:0006139
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987InterPro:IPR013785
PFAM:PF00274ScanProsite:PS00158PANTHER:PTHR11627PANTHER:PTHR11627:SF38SUPFAM:SSF51569EnsemblPlantsGene:TraesCS3D01G384000
EnsemblPlants:TraesCS3D01G384000.1TIGR:cd00948::::
Description
No Description!
Coordinates
chr3D:+:499630489..499632391
Molecular Weight (calculated)
38798.3 Da
IEP (calculated)
6.758
GRAVY (calculated)
-0.223
Length
358 amino acids
Sequence
(BLAST)
001: MSAYCGKYKD ELIQNAAYIG TPGKGILAAD ESTGTIGKRF ASINVENVED NRRALRELLF CTPGALQYLS GVILFEETLY QSTKGGKPFV DILKAGNVLP
101: GIKVDKGTIE LAGTNGETTT QGFDDLGKRC AKYYEAGARF AKWRAVLKIG ATEPSQLSID QNAQGLARYA IICQENGLVP IVEPEILVDG PHDIDRCAYV
201: TEVVLAACYK ALNDQHVLLE GTLLKPNMVT PGSDSKKVAP EVIAEYTVRT LQRTVPAAVP AIVFLSGGQS EEEATLNLNA MNKLQTKKPW NLSFSFGRAL
301: QQSTLKAWSG KTENEEKARA AFLVRCKANS EATLGTYKGD ATLAEGASES LHVKDYKY
Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)
001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY
Arabidopsis Description
FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.