Factsheet for TraesCS3D01G026400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

plastid: 16595579
plastid: 18419817
plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

msms PMID: 18419817 doi

FM Dupont

Western Regional Research Center, United States Department of Agriculture, Agricultural Research Service, 800 Buchanan Street, Albany, CA 94710K, USA.

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G025200.1	Wheat	plastid	97.93	98.96
KXG32068	Sorghum	plastid	91.21	91.21
TraesCS3A01G020300.1	Wheat	plastid	99.48	91.02
Zm00001d040084_P001	Maize	plastid	90.44	90.44
Os01t0118000-01	Rice	plastid	90.44	90.21
GSMUA_Achr6P09510_001	Banana	cytosol	81.14	89.2
Zm00001d003968_P001	Maize	cytosol, nucleus, plastid	34.37	88.67
Zm00001d028395_P001	Maize	cytosol, nucleus, plastid	34.11	88.0
KRG90928	Soybean	nucleus, plastid	85.79	85.57
KRH35847	Soybean	endoplasmic reticulum	86.05	85.38
Zm00001d008491_P001	Maize	plastid	90.96	84.62
KRH26114	Soybean	plastid	82.17	84.13
VIT_01s0011g04350.t01	Wine grape	plastid	85.01	83.72
GSMUA_AchrUn_...	Banana	plastid	83.46	82.4
Zm00001d051622_P001	Maize	cytosol	14.21	82.09
CDY40400	Canola	plastid	81.65	81.23
Bra014340.1-P	Field mustard	plastid	81.65	81.23
CDY37348	Canola	plastid	81.4	80.98
Solyc05g008600.2.1	Tomato	plastid	82.17	80.51
PGSC0003DMT400078520	Potato	extracellular, plastid	82.17	80.51
AT2G01140.1	Thale cress	plastid	80.62	79.8
HORVU3Hr1G002780.2	Barley	plastid	88.11	79.3
TraesCS5D01G122700.1	Wheat	plastid	74.16	74.55
TraesCS4D01G107400.1	Wheat	plastid	74.16	73.97
TraesCS3D01G383700.1	Wheat	golgi	51.16	55.31
TraesCS3D01G384000.1	Wheat	cytosol, golgi	51.16	55.31
TraesCS7D01G377400.1	Wheat	cytosol, golgi	51.42	55.28
TraesCS3D01G384100.2	Wheat	cytosol	51.16	54.1

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:1.2.5
MapMan:3.12.2	Gene3D:3.20.20.70	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	InterPro:IPR013785
PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF8	SUPFAM:SSF51569	EnsemblPlantsGene:TraesCS3D01G026400
EnsemblPlants:TraesCS3D01G026400.1	TIGR:cd00948	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:-:8971472..8975036

Molecular Weight (calculated)

41657.9 Da

IEP (calculated)

8.274

GRAVY (calculated)

-0.156

Length

387 amino acids

Sequence
(BLAST)

001: MAMVTAKLSS PAAARLAPVR SAQPARRASL VRVRASGGSY ADELVSTAKT VASPGRGILA IDESSATCGK RLASIGLDNT EVNRQAYRQL LLTTAGLGEY
101: ISGAILFEET LYQSTTDGKT FVDVLKDQNI MPGIKVDKGL VPLPGSNNES WCQGLDGLAS RCAEYYKQGA RFAKWRTVVS IPCGPTALAV KEAAWGLARY
201: AAIAQDNGLV PIVEPEILLD GDHGIERTLE VAEKVWSEVF FYLAENNVLF EGILLKPSMV TPGAEHKEKA SPEAIAKNTL TMLRRRVPPA VPGIMFLSGG
301: QSELEATMNL NAMNQSANPW HVSFSYARAL QNSVLKTWQG QPENIEAAQK ALLVRAKANS LAQLGSYTGE GESDEAKKGM FQKGYTY

Best Arabidopsis Sequence Match ( AT2G01140.1 )
(BLAST)

001: MASASFVKPN TLSSPWIGQR SFAHTSASSS PPPRVSFAIR AGAYSDELVK TAKSIASPGR GILAIDESNA TCGKRLASIG LDNTEDNRQA YRQLLLTTPG
101: LGDYISGSIL FEETLYQSTK DGKTFVDCLR DANIVPGIKV DKGLSPLAGS NEESWCQGLD GLASRSAEYY KQGARFAKWR TVVSVPCGPS ALAVKEAAWG
201: LARYAAISQD NGLVPIVEPE ILLDGDHPIE RTLEVAEKVW SEVFFYLAQN NVMFEGILLK PSMVTPGAEH KNKASPETVA DFTLTMLKRR VPPAVPGIMF
301: LSGGQSEAEA TLNLNAMNQS PNPWHVSFSY ARALQNSVLR TWQGKPEKIE ASQKALLVRA KANSLAQLGK YSAEGENEDA KKGMFVKGYT Y

Arabidopsis Description

FBA3Fructose-bisphosphate aldolase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU52]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.