Factsheet for TraesCS3B01G025200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 16481623
extracellular: 19786127
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 19786127 doi

FJ Kong, A Oyanagi, S Komatsu

National Institute of Crop Science, Tsukuba 305-8518, Japan.

msms PMID: 16481623 doi

Y Balmer, WH Vensel, N Cai, W Manieri, P Schürmann, WJ Hurkman, BB Buchanan

Department of Plant and Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G026400.1	Wheat	plastid	98.96	97.93
KXG32068	Sorghum	plastid	91.38	90.44
Zm00001d040084_P001	Maize	plastid	90.6	89.66
Os01t0118000-01	Rice	plastid	90.6	89.43
TraesCS3A01G020300.1	Wheat	plastid	98.43	89.13
GSMUA_Achr6P09510_001	Banana	cytosol	81.72	88.92
Zm00001d003968_P001	Maize	cytosol, nucleus, plastid	34.73	88.67
Zm00001d028395_P001	Maize	cytosol, nucleus, plastid	34.46	88.0
KRG90928	Soybean	nucleus, plastid	86.16	85.05
KRH35847	Soybean	endoplasmic reticulum	86.42	84.87
Zm00001d008491_P001	Maize	plastid	91.12	83.89
KRH26114	Soybean	plastid	82.51	83.6
VIT_01s0011g04350.t01	Wine grape	plastid	85.64	83.46
GSMUA_AchrUn_...	Banana	plastid	84.07	82.14
Zm00001d051622_P001	Maize	cytosol	14.36	82.09
Bra014340.1-P	Field mustard	plastid	82.25	80.98
CDY40400	Canola	plastid	82.25	80.98
CDY37348	Canola	plastid	81.98	80.72
Solyc05g008600.2.1	Tomato	plastid	83.03	80.51
PGSC0003DMT400078520	Potato	extracellular, plastid	83.03	80.51
AT2G01140.1	Thale cress	plastid	81.46	79.8
HORVU3Hr1G002780.2	Barley	plastid	87.99	78.37
TraesCS5B01G115300.1	Wheat	golgi	74.41	74.03
TraesCS4B01G109900.1	Wheat	plastid	74.15	73.2
TraesCS3B01G423200.1	Wheat	cytosol	52.22	55.87
TraesCS7B01G283000.1	Wheat	cytosol	52.48	55.83
TraesCS3B01G422900.1	Wheat	cytosol	49.35	55.1

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:1.2.5
MapMan:3.12.2	Gene3D:3.20.20.70	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	InterPro:IPR013785
PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF8	SUPFAM:SSF51569	EnsemblPlantsGene:TraesCS3B01G025200
EnsemblPlants:TraesCS3B01G025200.1	TIGR:cd00948	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:+:10953636..10956618

Molecular Weight (calculated)

41162.2 Da

IEP (calculated)

8.274

GRAVY (calculated)

-0.178

Length

383 amino acids

Sequence
(BLAST)

001: MVTAKLSSPA AARLAPSAGS ARRASRVRVR ASGGSYADEL VSTAKTVASP GRGILAIDES SATCGKRLAS IGLDNTEVNR QAYRQLLLTT AGLGEYISGA
101: ILFEETLYQS TTDGKTFVDV LKDQNIMPGI KVDKGLVPLP GSNNESWCQG LDGLASRCAE YYKQGARFAK WRTVVSIPCG PTALAVKEAA WGLARYAAIA
201: QDNGLVPIVE PEILLDGDHG IERTLEVAEK VWSEVFFYLA ENNVLFEGIL LKPSMVTPGA EHKEKASPEA IAKNTLTMLR RRVPPAVPGI MFLSGGQSEL
301: EATMNLNAMN QSANPWHVSF SYARALQNSV LKTWQGQPEN IEAAQKALLV RAKANSLAQL GSYTGEGESD EAKKGMFQKG YTY

Best Arabidopsis Sequence Match ( AT2G01140.1 )
(BLAST)

001: MASASFVKPN TLSSPWIGQR SFAHTSASSS PPPRVSFAIR AGAYSDELVK TAKSIASPGR GILAIDESNA TCGKRLASIG LDNTEDNRQA YRQLLLTTPG
101: LGDYISGSIL FEETLYQSTK DGKTFVDCLR DANIVPGIKV DKGLSPLAGS NEESWCQGLD GLASRSAEYY KQGARFAKWR TVVSVPCGPS ALAVKEAAWG
201: LARYAAISQD NGLVPIVEPE ILLDGDHPIE RTLEVAEKVW SEVFFYLAQN NVMFEGILLK PSMVTPGAEH KNKASPETVA DFTLTMLKRR VPPAVPGIMF
301: LSGGQSEAEA TLNLNAMNQS PNPWHVSFSY ARALQNSVLR TWQGKPEKIE ASQKALLVRA KANSLAQLGK YSAEGENEDA KKGMFVKGYT Y

Arabidopsis Description

FBA3Fructose-bisphosphate aldolase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU52]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.