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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • cytosol 4
  • plastid 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 plasma membrane: 18260611
extracellular: 19038476
plasma membrane: 19526560
extracellular: 21255809
plastid: 21433289
extracellular: 24083427
golgi: 25047511
extracellular: 26072143
plasma membrane: 27800704
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID: 21255809 doi
T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki
National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
msms PMID: 25047511 doi
Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han
Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.
msms PMID: 19526560 doi
Y Cheng, Y Qi, Q Zhu, X Chen, N Wang, X Zhao, H Chen, X Cui, L Xu, W Zhang
Department of Biochemistry and Molecular Biology, College of Life Science, Nanjing Agricultural University, Nanjing, Jiangsu, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES04064 Sorghum cytosol 89.49 83.94
Zm00001d042453_P001 Maize plasma membrane 89.19 83.66
Zm00001d012103_P001 Maize extracellular, plasma membrane 88.59 83.1
HORVU3Hr1G088500.2 Barley cytosol 55.86 83.04
Os10t0163340-01 Rice cytosol, extracellular, plasma membrane, plastid 89.19 82.96
EES06798 Sorghum cytosol 88.59 82.4
Os01t0905800-01 Rice cytosol, extracellular 87.39 81.28
TraesCS3A01G391500.1 Wheat cytosol, golgi, unclear 87.09 81.01
TraesCS3B01G423200.1 Wheat cytosol 86.79 80.73
TraesCS3A01G391100.1 Wheat golgi 86.79 80.73
TraesCS3B01G422900.1 Wheat cytosol 82.88 80.47
TraesCS3D01G384000.1 Wheat cytosol, golgi 86.49 80.45
TraesCS3D01G383700.1 Wheat golgi 86.19 80.17
TraesCS3D01G384100.2 Wheat cytosol 84.38 76.78
GSMUA_Achr5P25490_001 Banana cytosol 75.68 76.6
GSMUA_Achr8P08990_001 Banana cytosol 76.58 76.58
VIT_08s0007g03830.t01 Wine grape cytosol, extracellular 81.98 76.26
HORVU3Hr1G088570.1 Barley mitochondrion, plasma membrane 86.79 76.25
HORVU3Hr1G088540.1 Barley cytosol, mitochondrion, plastid 87.09 74.94
Solyc10g083570.1.1 Tomato extracellular 80.18 74.58
PGSC0003DMT400072632 Potato cytosol 79.88 74.3
GSMUA_Achr8P01230_001 Banana cytosol 70.57 74.13
Solyc09g009260.2.1 Tomato extracellular, nucleus, plastid 78.98 73.46
KRH67855 Soybean endoplasmic reticulum 78.68 73.18
PGSC0003DMT400006894 Potato cytosol 78.38 72.91
AT3G52930.1 Thale cress cytosol 78.38 72.91
AT2G36460.1 Thale cress cytosol 78.08 72.63
KRH16972 Soybean nucleus 77.78 72.35
Bra028543.1-P Field mustard cytosol 77.48 72.07
KRH72603 Soybean nucleus 77.18 71.79
GSMUA_Achr8P07620_001 Banana mitochondrion, plastid 78.38 71.51
KRH20036 Soybean cytosol, mitochondrion, nucleus 76.28 70.95
Bra017234.1-P Field mustard cytosol 72.67 70.55
Bra009517.1-P Field mustard cytosol 75.98 70.47
Os08t0120600-01 Rice cytosol, plasma membrane, plastid 76.58 70.44
KRH32664 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 75.68 70.39
Bra019639.1-P Field mustard cytosol 75.68 70.39
Os06t0608700-03 Rice cytosol 73.27 68.16
Bra006960.1-P Field mustard cytosol 77.18 67.99
AT5G03690.1 Thale cress mitochondrion 75.68 64.12
TraesCS5A01G009400.1 Wheat cytosol 45.05 59.06
Os01t0118000-01 Rice plastid 53.15 45.62
Os11t0171300-01 Rice extracellular, plastid 52.85 45.36
Bra017233.1-P Field mustard nucleus, plastid 76.58 19.27
Os10t0163310-01 Rice plastid 8.11 18.0
Protein Annotations
KEGG:00010+4.1.2.13KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13KEGG:00710+4.1.2.13MapMan:2.1.1.2
MapMan:3.1.2.2Gene3D:3.20.20.70InterPro:Aldolase_I_ASInterPro:Aldolase_TIMncoils:CoilInterPro:FBA_I
GO:GO:0003674GO:GO:0003824GO:GO:0004332GO:GO:0005975GO:GO:0006091GO:GO:0006096
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987
GO:GO:0016829InterPro:IPR013785EnsemblPlantsGene:Os05g0402700EnsemblPlants:Os05t0402700-01PFAM:PF00274ScanProsite:PS00158
PANTHER:PTHR11627PANTHER:PTHR11627:SF35SUPFAM:SSF51569UniParc:UPI0000E124BF::
Description
fructose-diphosphate aldolase, aldolase isozyme C-2, aldolase C-2, cytoplasmic aldolase C-2Similar to Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13). (Os05t0402700-01)
Coordinates
chr5:+:19606771..19608914
Molecular Weight (calculated)
36233.7 Da
IEP (calculated)
6.987
GRAVY (calculated)
-0.134
Length
333 amino acids
Sequence
(BLAST)
001: MSAYCGKYKD ELIKNAAYIG TPGKGILAAD ESTGTIGKRF ASINVENVEE NRRSLRELLF CTPGALQYLS GVILFEETLY QKTKDGKPFV DVLKEGGVLP
101: GIKVDKGTIE VAGTEKETTT QGHDDLGKRC AKYYEAGARF AKWRAVLKIG PNEPSQLAID LNAQGLARYA IICQENGLVP IVEPEILVDG PHDIDRCAYV
201: SEVVLAACYK ALNEHHVLLE GTLLKPNMVT PGSDAKKVSP EVIAEYTVRT LQRTVPAAVP AIVFLSGGQS EEEATLNLNA MNKLSTKKPW SLSFSFGRAL
301: QQSTLREPSR QGLQVLICLG RCWLPLEHSA AVA
Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)
001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY
Arabidopsis Description
FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.