Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0171300-01 | Rice | extracellular, plastid | 26.0 | 10.05 |
| Os06t0608700-03 | Rice | cytosol | 23.33 | 9.78 |
| Os01t0118000-01 | Rice | plastid | 24.0 | 9.28 |
| Os10t0163340-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 22.0 | 9.22 |
| Os08t0120600-01 | Rice | cytosol, plasma membrane, plastid | 22.0 | 9.12 |
| Os01t0905800-01 | Rice | cytosol, extracellular | 21.33 | 8.94 |
| Os05t0402700-01 | Rice | extracellular | 18.0 | 8.11 |
Protein Annotations
| EnsemblPlants:Os10t0163310-01 | EnsemblPlantsGene:Os10g0163310 | PANTHER:PTHR11440 | PANTHER:PTHR11440:SF50 | ProteinID:BAT10025.1 | SEG:seg |
| UniParc:UPI000393944C | UniProt:A0A0P0XS28 | MapMan:35.2 | : | : | : |
Description
Hypothetical conserved gene. (Os10t0163310-01)
Coordinates
chr10:-:4338836..4340390
Molecular Weight (calculated)
15779.4 Da
IEP (calculated)
11.243
GRAVY (calculated)
-0.637
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: SCIGCCRSSS SSHSSTSPAD GGTPPPPRRA GATRPPVVSP RSCCCRGAPA ASWRHASRTP TCRRRRNAPR TTTRPTAGGS GCGRTPRSWT TPSSRAPCVA
101: DQLRLVFDHA AGDYHGVPGV ETRVLDFGST RGFLADVPAN SSARRDYCLP
101: DQLRLVFDHA AGDYHGVPGV ETRVLDFGST RGFLADVPAN SSARRDYCLP
001: MKKISSHYSV VIAILVVVTM TSMCQAVGSN VYPLILVPGN GGNQLEVRLD REYKPSSVWC SSWLYPIHKK SGGWFRLWFD AAVLLSPFTR CFSDRMMLYY
101: DPDLDDYQNA PGVQTRVPHF GSTKSLLYLD PRLRDATSYM EHLVKALEKK CGYVNDQTIL GAPYDFRYGL AASGHPSRVA SQFLQDLKQL VEKTSSENEG
201: KPVILLSHSL GGLFVLHFLN RTTPSWRRKY IKHFVALAAP WGGTISQMKT FASGNTLGVP LVNPLLVRRH QRTSESNQWL LPSTKVFHDR TKPLVVTPQV
301: NYTAYEMDRF FADIGFSQGV VPYKTRVLPL TEELMTPGVP VTCIYGRGVD TPEVLMYGKG GFDKQPEIKY GDGDGTVNLA SLAALKVDSL NTVEIDGVSH
401: TSILKDEIAL KEIMKQISII NYELANVNAV NE
101: DPDLDDYQNA PGVQTRVPHF GSTKSLLYLD PRLRDATSYM EHLVKALEKK CGYVNDQTIL GAPYDFRYGL AASGHPSRVA SQFLQDLKQL VEKTSSENEG
201: KPVILLSHSL GGLFVLHFLN RTTPSWRRKY IKHFVALAAP WGGTISQMKT FASGNTLGVP LVNPLLVRRH QRTSESNQWL LPSTKVFHDR TKPLVVTPQV
301: NYTAYEMDRF FADIGFSQGV VPYKTRVLPL TEELMTPGVP VTCIYGRGVD TPEVLMYGKG GFDKQPEIKY GDGDGTVNLA SLAALKVDSL NTVEIDGVSH
401: TSILKDEIAL KEIMKQISII NYELANVNAV NE
Arabidopsis Description
LCAT1Lecithin-cholesterol acyltransferase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZI8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.