Factsheet for Os08t0120600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G36460.1	Thale cress	cytosol	80.66	81.56
Os10t0163340-01	Rice	cytosol, extracellular, plasma membrane, plastid	79.28	80.17
Os01t0905800-01	Rice	cytosol, extracellular	79.28	80.17
KRH16972	Soybean	nucleus	79.28	80.17
AT3G52930.1	Thale cress	cytosol	79.01	79.89
VIT_08s0007g03830.t01	Wine grape	cytosol, extracellular	79.01	79.89
PGSC0003DMT400072632	Potato	cytosol	78.73	79.61
KRH20036	Soybean	cytosol, mitochondrion, nucleus	78.73	79.61
Bra028543.1-P	Field mustard	cytosol	78.45	79.33
Solyc10g083570.1.1	Tomato	extracellular	78.45	79.33
Bra019639.1-P	Field mustard	cytosol	77.9	78.77
KRH32664	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	77.9	78.77
KRH67855	Soybean	endoplasmic reticulum	77.9	78.77
Bra009517.1-P	Field mustard	cytosol	77.9	78.55
KRH72603	Soybean	nucleus	77.62	78.49
PGSC0003DMT400006894	Potato	cytosol	77.62	78.49
Solyc09g009260.2.1	Tomato	extracellular, nucleus, plastid	77.62	78.49
Os05t0402700-01	Rice	extracellular	70.44	76.58
Bra006960.1-P	Field mustard	cytosol	78.73	75.4
Os06t0608700-03	Rice	cytosol	73.48	74.3
Bra017234.1-P	Field mustard	cytosol	70.17	74.05
AT5G03690.1	Thale cress	mitochondrion	77.35	71.25
CDY69912	Canola	cytosol	8.29	66.67
Os11t0171300-01	Rice	extracellular, plastid	56.35	52.58
Os01t0118000-01	Rice	plastid	55.25	51.55
Os10t0163310-01	Rice	plastid	9.12	22.0
Bra017233.1-P	Field mustard	nucleus, plastid	78.18	21.39

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	EntrezGene:4344545	EMBL:AK069887	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM
ProteinID:BAD10819.1	ProteinID:BAF22794.1	ProteinID:BAT03594.1	ProteinID:EAZ41341.1	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829
InterPro:IPR013785	EnsemblPlantsGene:Os08g0120600	EnsemblPlants:Os08t0120600-01	PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627
PANTHER:PTHR11627:SF35	UniProt:Q6YPF1	SUPFAM:SSF51569	UniParc:UPI000023B184	RefSeq:XP_015649702.1	SEG:seg

Description

Similar to Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13). (Os08t0120600-01)

Coordinates

chr8:-:1127884..1129553

Molecular Weight (calculated)

38395.7 Da

IEP (calculated)

7.076

GRAVY (calculated)

-0.116

Length

362 amino acids

Sequence
(BLAST)

001: MSAYCGKYKD ELIRNAAYIG TPGKGILAAD ESTGTIGKRL ASIGVENVEE NRRALRELLF TAPGALDCLS GVILFEETLY QSTRDGTPFV DVLAAAGVLA
101: GIKVDKGTVE LAGTDRETTT QGHDGLGERC RRYYAAGARF AKWRAVLSIG RASSRPSQLA VDANAQGLAR YAIICQENGL VPIVEPEILV DGEHGIEACA
201: EVTERVLAAC YKALSDHHVL LEGTLLKPNM VTPGSDAARA PPEVVAEHTV RALLRTVPPA VPAIVFLSGG QSEEEATRNL NAMNQVASRG KKPWSLTFSF
301: GRALQQSTLK AWAGKAENVG KAQAALLARC RANSQATLGA YAGDAAAGEG VSENLHVKDY KY

Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)

001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY

Arabidopsis Description

FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.