Factsheet for Solyc09g009260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, nucleus

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

extracellular: 22892874
plastid: 22908117
nucleus: 25464976
plastid: 26371478
unclear: 26455813
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 22892874 doi

EH Konozy, H Rogniaux, M Causse, M Faurobert

Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006894	Potato	cytosol	98.32	98.32
Solyc10g083570.1.1	Tomato	extracellular	93.3	93.3
VIT_08s0007g03830.t01	Wine grape	cytosol, extracellular	86.03	86.03
TraesCS3B01G422900.1	Wheat	cytosol	81.56	85.13
AT2G36460.1	Thale cress	cytosol	84.92	84.92
KRH67855	Soybean	endoplasmic reticulum	84.64	84.64
EES06798	Sorghum	cytosol	84.64	84.64
KRH16972	Soybean	nucleus	84.36	84.36
Zm00001d042453_P001	Maize	plasma membrane	83.52	84.23
Zm00001d012103_P001	Maize	extracellular, plasma membrane	83.52	84.23
Os01t0905800-01	Rice	cytosol, extracellular	84.08	84.08
EES04064	Sorghum	cytosol	83.24	83.94
Bra009517.1-P	Field mustard	cytosol	84.08	83.84
TraesCS3D01G384000.1	Wheat	cytosol, golgi	83.8	83.8
TraesCS3D01G383700.1	Wheat	golgi	83.8	83.8
TraesCS3B01G423200.1	Wheat	cytosol	83.8	83.8
KRH72603	Soybean	nucleus	83.8	83.8
TraesCS3A01G391500.1	Wheat	cytosol, golgi, unclear	83.52	83.52
TraesCS3A01G391100.1	Wheat	golgi	83.52	83.52
KRH20036	Soybean	cytosol, mitochondrion, nucleus	83.52	83.52
KRH32664	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	83.24	83.24
Os10t0163340-01	Rice	cytosol, extracellular, plasma membrane, plastid	82.96	82.96
CDX76248	Canola	cytosol	82.68	82.68
CDY66283	Canola	cytosol	82.68	82.68
GSMUA_Achr11P...	Banana	cytosol	44.69	82.47
CDY13330	Canola	cytosol	82.4	82.4
CDX67550	Canola	cytosol	82.4	82.4
CDX73593	Canola	cytosol, extracellular	82.12	82.12
CDX78134	Canola	cytosol	82.12	82.12
AT3G52930.1	Thale cress	cytosol	81.84	81.84
Bra028543.1-P	Field mustard	cytosol	81.84	81.84
Bra019639.1-P	Field mustard	cytosol	81.01	81.01
TraesCS3D01G384100.2	Wheat	cytosol	82.4	80.6
GSMUA_Achr11P...	Banana	cytosol	29.33	80.15
Solyc07g065900.2.1	Tomato	nucleus	79.89	80.11
HORVU3Hr1G088570.1	Barley	mitochondrion, plasma membrane	83.8	79.16
Os05t0402700-01	Rice	extracellular	73.46	78.98
Bra017234.1-P	Field mustard	cytosol	74.86	78.13
CDY43716	Canola	cytosol	74.58	77.84
Os08t0120600-01	Rice	cytosol, plasma membrane, plastid	78.49	77.62
HORVU3Hr1G088540.1	Barley	cytosol, mitochondrion, plastid	83.8	77.52
Bra006960.1-P	Field mustard	cytosol	81.28	76.98
AT5G03690.1	Thale cress	mitochondrion	84.36	76.84
HORVU3Hr1G088500.2	Barley	cytosol	48.04	76.79
TraesCS5A01G009400.1	Wheat	cytosol	48.32	68.11
Solyc02g062340.2.1	Tomato	plastid	55.87	50.63
Solyc05g008600.2.1	Tomato	plastid	55.59	50.38
Solyc10g054390.1.1	Tomato	mitochondrion	18.99	50.0
Solyc02g084440.2.1	Tomato	plastid	54.75	50.0
Solyc01g110360.2.1	Tomato	plastid	55.03	49.62
Solyc10g054340.1.1	Tomato	plastid	9.5	32.08
Bra017233.1-P	Field mustard	nucleus, plastid	84.64	22.9

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829
InterPro:IPR013785	UniProt:K4CQV5	PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF24
PANTHER:PTHR11627:SF38	SUPFAM:SSF51569	EnsemblPlantsGene:Solyc09g009260.2	EnsemblPlants:Solyc09g009260.2.1	UniParc:UPI000276C4D2	:

Description

Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:K4CQV5]

Coordinates

chr9:-:2643600..2645801

Molecular Weight (calculated)

38679.4 Da

IEP (calculated)

7.689

GRAVY (calculated)

-0.230

Length

358 amino acids

Sequence
(BLAST)

001: MSCYKGKYAD ELIKNATYIG TPGKGILAAD ESTGTIGKRL SSINVENVES NRRALRELLF CTPGCLQYLS GVILFEETLY QKTAAGKPFV EVMKEAGVLP
101: GIKVDKGTVE LPGTDGETTT QGLDGLAERC QKYYEAGARF AKWRAVLKIG ANEPSQLAIN DNANGLARYA IICQQNGLVP IVEPEILVDG AHDIKKCADV
201: TERVLAACYK ALNDHHVLLE GTLLKPNMVT PGSESPKVAP EVIAEYTVRA LQRTMPPAVP AVVFLSGGQS EEEATVNLNA MNKLQTKKPW SLSFSFGRAL
301: QQSTLKAWGG KEENVQKAQA AFLTRCKANS EATLGKYVGA SNLSEGASES LHVKDYKY

Best Arabidopsis Sequence Match ( AT2G36460.1 )
(BLAST)

001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY

Arabidopsis Description

FBA6Fructose-bisphosphate aldolase 6, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.