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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 10
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
plastid: 20363867
extracellular: 22364583
extracellular: 22892874
plastid: 22908117
plastid: 26371478
plastid: 28183294
nucleus: 28394025
extracellular: 29876421
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID: 20363867 doi
C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID: 22892874 doi
EH Konozy, H Rogniaux, M Causse, M Faurobert
Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID: 26371478 doi
M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID: 22364583 doi
P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
msms PMID: 28183294 doi
R Tamburino, M Vitale, A Ruggiero, M Sassi, L Sannino, S Arena, A Costa, G Batelli, N Zambrano, A Scaloni, S Grillo, N Scotti
Center of Genetics Engineering (CEINGE) Biotecnologie Avanzate S.c. a R.l, via Pansini, 80100, Napoli, Italy., Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, via Pansini, 80100, Napoli, Italy., Institute for the Animal Production System in the Mediterranean Environment, National Research Council of Italy (CNR-ISPAAM), via Argine 1085, 80147, Napoli, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy. nscotti@unina.it.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400008103 Potato cytosol, extracellular, plastid 99.75 99.75
Solyc02g084440.2.1 Tomato plastid 91.44 92.6
VIT_04s0023g03010.t01 Wine grape plastid 92.19 92.42
Solyc02g062340.2.1 Tomato plastid 90.93 91.39
VIT_03s0038g00670.t01 Wine grape plastid 90.18 89.95
GSMUA_Achr5P19920_001 Banana plasma membrane, plastid 87.66 89.0
Os11t0171300-01 Rice extracellular, plastid 86.15 88.14
GSMUA_Achr6P17900_001 Banana plastid 84.89 86.63
Zm00001d023559_P001 Maize plastid 84.13 86.08
EES09371 Sorghum plastid 84.13 86.08
TraesCS5A01G108000.1 Wheat plastid 83.12 85.71
TraesCS5D01G122700.1 Wheat plastid 83.12 85.71
EES16731 Sorghum plastid 83.88 85.6
GSMUA_Achr8P17280_001 Banana plastid 83.63 85.57
HORVU5Hr1G032980.1 Barley plastid 82.87 85.45
TraesCS5B01G115300.1 Wheat golgi 82.87 85.45
TraesCS4A01G206400.1 Wheat plastid 83.38 85.31
HORVU4Hr1G019570.1 Barley plastid 83.12 85.05
TraesCS4B01G109900.1 Wheat plastid 83.12 85.05
TraesCS4D01G107400.1 Wheat plastid 83.12 85.05
Zm00001d053015_P001 Maize plastid 83.63 84.26
Solyc05g008600.2.1 Tomato plastid 77.33 77.72
Solyc10g054390.1.1 Tomato mitochondrion 24.94 72.79
Solyc10g054340.1.1 Tomato plastid 16.62 62.26
Solyc07g065900.2.1 Tomato nucleus 51.39 57.14
Solyc10g083570.1.1 Tomato extracellular 49.62 55.03
Solyc09g009260.2.1 Tomato extracellular, nucleus, plastid 49.62 55.03
Protein Annotations
KEGG:00010+4.1.2.13KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13KEGG:00710+4.1.2.13MapMan:1.2.5
MapMan:3.12.2Gene3D:3.20.20.70InterPro:Aldolase_I_ASInterPro:Aldolase_TIMInterPro:FBA_IGO:GO:0003674
GO:GO:0003824GO:GO:0004332GO:GO:0005975GO:GO:0006091GO:GO:0006096GO:GO:0006139
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016829
InterPro:IPR013785UniProt:K4B3P9PFAM:PF00274ScanProsite:PS00158PANTHER:PTHR11627PANTHER:PTHR11627:SF22
SUPFAM:SSF51569EnsemblPlantsGene:Solyc01g110360.2EnsemblPlants:Solyc01g110360.2.1UniParc:UPI0002768FA2::
Description
Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:K4B3P9]
Coordinates
chr1:+:97083797..97086446
Molecular Weight (calculated)
42776.1 Da
IEP (calculated)
7.336
GRAVY (calculated)
-0.126
Length
397 amino acids
Sequence
(BLAST)
001: MASASLLKSS PVLDKSEFLK GQSLRQPSVS VVRCHPTNAT SLTVRAASSY ADELIKTAKT VASPGRGILA MDESNATCGK RLASIGLENT EANRQAYRTL
101: LVSAPGLGQY ISGAILFEET LYQSTVDGRK IVDVLIEQNI VPGIKVDKGL VPLAGSNDES WCQGLDGLAS RSAAYYQQGA RFAKWRTVVS IPNGPSALAV
201: KEAAWGLARY AAISQDNGLV PIVEPEILLD GEHGIDRTFE VAQKVWAEVF FYLAENNVMF EGILLKPSMV TPGAECKDRA TPQQVADYTL SLLKRRIPPA
301: VPGIMFLSGG QSEVEATLNL NAMNQAPNPW HVSFSYARAL QNTCLKTWGG QPENVKAAQD TLLVRAKANS LAQLGKYTGE GESDEAKQGM FVKGYVY
Best Arabidopsis Sequence Match ( AT4G38970.1 )
(BLAST)
001: MASTSLLKAS PVLDKSEWVK GQSVLFRQPS SASVVLRNRA TSLTVRAASS YADELVKTAK TIASPGRGIL AMDESNATCG KRLDSIGLEN TEANRQAFRT
101: LLVSAPGLGQ YVSGAILFEE TLYQSTTEGK KMVDVLVEQN IVPGIKVDKG LVPLVGSNNE SWCQGLDGLS SRTAAYYQQG ARFAKWRTVV SIPNGPSALA
201: VKEAAWGLAR YAAISQDSGL VPIVEPEILL DGEHDIDRTY DVAEKVWAEV FFYLAQNNVM FEGILLKPSM VTPGAESKDR ATPEQVAAYT LKLLRNRVPP
301: AVPGIMFLSG GQSEVEATLN LNAMNQAPNP WHVSFSYARA LQNTCLKTWG GRPENVNAAQ TTLLARAKAN SLAQLGKYTG EGESEEAKEG MFVKGYTY
Arabidopsis Description
FBA2Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178UW98]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.