Factsheet for Solyc02g062340.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 20363867
extracellular: 22364583
extracellular: 22892874
plastid: 22908117
plastid: 28183294
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 22892874 doi

EH Konozy, H Rogniaux, M Causse, M Faurobert

Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

msms PMID: 28183294 doi

R Tamburino, M Vitale, A Ruggiero, M Sassi, L Sannino, S Arena, A Costa, G Batelli, N Zambrano, A Scaloni, S Grillo, N Scotti

Center of Genetics Engineering (CEINGE) Biotecnologie Avanzate S.c. a R.l, via Pansini, 80100, Napoli, Italy., Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, via Pansini, 80100, Napoli, Italy., Institute for the Animal Production System in the Mediterranean Environment, National Research Council of Italy (CNR-ISPAAM), via Argine 1085, 80147, Napoli, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy. nscotti@unina.it.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031351	Potato	cytosol, extracellular, plastid	98.48	98.48
Solyc02g084440.2.1	Tomato	plastid	90.89	91.58
Solyc01g110360.2.1	Tomato	plastid	91.39	90.93
KRH29349	Soybean	plastid	88.35	87.47
KRH29352	Soybean	plastid	88.35	87.47
KRH60768	Soybean	plastid	87.34	87.34
KRH24377	Soybean	plastid	87.85	87.19
Solyc05g008600.2.1	Tomato	plastid	78.23	78.23
Solyc10g054390.1.1	Tomato	mitochondrion	24.56	71.32
Solyc07g065900.2.1	Tomato	nucleus	52.41	57.98
Solyc10g054340.1.1	Tomato	plastid	15.19	56.6
Solyc09g009260.2.1	Tomato	extracellular, nucleus, plastid	50.63	55.87
Solyc10g083570.1.1	Tomato	extracellular	50.63	55.87

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:1.2.5
MapMan:3.12.2	Gene3D:3.20.20.70	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829
InterPro:IPR013785	UniProt:K4B6C3	PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF16
SUPFAM:SSF51569	EnsemblPlantsGene:Solyc02g062340.2	EnsemblPlants:Solyc02g062340.2.1	UniParc:UPI00027680AA	:	:

Description

Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:K4B6C3]

Coordinates

chr2:-:33952212..33954620

Molecular Weight (calculated)

42672.9 Da

IEP (calculated)

6.314

GRAVY (calculated)

-0.155

Length

395 amino acids

Sequence
(BLAST)

001: MASASLLKTS PVINKTDFIK GQALRQPSVS VNVVRSHPSG LTVRASSYAD ELVKTAKTVA SPGRGILAMD ESNATCGKRL DSIGLENTEA NRQAYRTLLV
101: SAPGLGNYIS GAILFEETLY QSTVDGKKIV DVLLEQNIVP GIKVDKGLVP LAGSNNESWC QGLDGLASRS AAYYQQGARF AKWRTVVSIP NGPSALAVKE
201: AAWGLARYAA ISQDNGLVPI VEPEILLDGE HNIDRTFEVA QQVWAEVFFY LAENNVMFEG ILLKPSMVTP GAECKERATP EQVADYTLKL LQRRIPPAVP
301: GIMFLSGGQS EVEATLNLNA MNQSPNPWHV SFSYARALQN TCLKTWGGRP ENVEAAQKAL LTRASANSLA QLGKYTGEGE SEEAKEGMFV KGYVY

Best Arabidopsis Sequence Match ( AT4G38970.1 )
(BLAST)

001: MASTSLLKAS PVLDKSEWVK GQSVLFRQPS SASVVLRNRA TSLTVRAASS YADELVKTAK TIASPGRGIL AMDESNATCG KRLDSIGLEN TEANRQAFRT
101: LLVSAPGLGQ YVSGAILFEE TLYQSTTEGK KMVDVLVEQN IVPGIKVDKG LVPLVGSNNE SWCQGLDGLS SRTAAYYQQG ARFAKWRTVV SIPNGPSALA
201: VKEAAWGLAR YAAISQDSGL VPIVEPEILL DGEHDIDRTY DVAEKVWAEV FFYLAQNNVM FEGILLKPSM VTPGAESKDR ATPEQVAAYT LKLLRNRVPP
301: AVPGIMFLSG GQSEVEATLN LNAMNQAPNP WHVSFSYARA LQNTCLKTWG GRPENVNAAQ TTLLARAKAN SLAQLGKYTG EGESEEAKEG MFVKGYTY

Arabidopsis Description

FBA2Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178UW98]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.