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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g110360.2.1 Tomato plastid 62.26 16.62
Solyc02g062340.2.1 Tomato plastid 56.6 15.19
Solyc02g084440.2.1 Tomato plastid 55.66 15.05
Solyc05g008600.2.1 Tomato plastid 48.11 12.91
Solyc07g065900.2.1 Tomato nucleus 34.91 10.36
Solyc10g083570.1.1 Tomato extracellular 33.02 9.78
Solyc09g009260.2.1 Tomato extracellular, nucleus, plastid 32.08 9.5
Solyc10g054390.1.1 Tomato mitochondrion 3.77 2.94
Protein Annotations
KEGG:00010+4.1.2.13KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13KEGG:00710+4.1.2.13Gene3D:3.20.20.70
MapMan:35.1InterPro:Aldolase_TIMInterPro:FBA_IGO:GO:0003674GO:GO:0003824GO:GO:0004332
GO:GO:0005975GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009058GO:GO:0009987InterPro:IPR013785UniProt:K4D132PFAM:PF00274
PANTHER:PTHR11627PANTHER:PTHR11627:SF16SUPFAM:SSF51569EnsemblPlantsGene:Solyc10g054340.1EnsemblPlants:Solyc10g054340.1.1UniParc:UPI000276A9F9
SEG:seg:::::
Description
No Description!
Coordinates
chr10:+:55258713..55259457
Molecular Weight (calculated)
11763.2 Da
IEP (calculated)
9.154
GRAVY (calculated)
0.011
Length
106 amino acids
Sequence
(BLAST)
001: MASASLLKSS VVVDKSEFVK GQCFNFFYVM SSLKPLKRLH HQVWNSGYGR VKCYPCGKTL ASIGLENTEA NRQVYRILLV AAPGLGQYIS GAILFEETFY
101: QSTTDG
Best Arabidopsis Sequence Match ( AT4G38970.2 )
(BLAST)
001: MASTSLLKAS PVLDKSEWVK GQSVLFRQPS SASVVLRNRA TSLTVRAASS YADELVKTAK TIASPGRGIL AMDESNATCG KRLDSIGLEN TEANRQAFRT
101: LLVSAPGLGQ YVSGAILFEE TLYQSTTEGK KMVDVLVEQN IVPGIKVDKG LVPLVGSNNE SWCQGLDGLS SRTAAYYQQG ARFAKWRTVV SIPNGPSALA
201: VKEAAWGLAR YAAISQDSGL VPIVEPEILL DGEHDIDRTY DVAEKVWAEV FFYLAQNNVM FEGILLKPSM VTPGAESKDR ATPEQVAAYT LKLLRNRVPP
301: AVPGIMAIFV RRTVGGGGNT QLERNEPGTK PMARVLLLRT CVAEHLSENM GRQTRERERS SDHSLGPCQG QFVGSARKIH R
Arabidopsis Description
FBA2Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178UW98]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.