Factsheet for Solyc07g065900.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057332	Potato	cytosol	94.12	97.39
KRH14187	Soybean	cytosol, nucleus	91.6	91.6
VIT_19s0015g01720.t01	Wine grape	cytosol	91.04	91.04
KRH73948	Soybean	cytosol, endoplasmic reticulum	90.48	90.48
AT4G26530.3	Thale cress	cytosol	88.24	87.99
GSMUA_Achr3P12000_001	Banana	cytosol, plasma membrane	81.51	86.61
Os06t0608700-03	Rice	cytosol	83.75	83.52
TraesCS7B01G283000.1	Wheat	cytosol	82.63	81.94
TraesCS7D01G377400.1	Wheat	cytosol, golgi	82.35	81.67
EER88632	Sorghum	cytosol	80.95	80.73
AT4G26520.3	Thale cress	cytosol	80.67	80.45
Solyc09g009260.2.1	Tomato	extracellular, nucleus, plastid	80.11	79.89
Solyc10g083570.1.1	Tomato	extracellular	79.27	79.05
TraesCS7A01G381100.2	Wheat	endoplasmic reticulum, mitochondrion	82.91	75.9
Solyc02g062340.2.1	Tomato	plastid	57.98	52.41
Solyc05g008600.2.1	Tomato	plastid	57.98	52.41
Solyc02g084440.2.1	Tomato	plastid	57.14	52.04
Solyc10g054390.1.1	Tomato	mitochondrion	19.61	51.47
Solyc01g110360.2.1	Tomato	plastid	57.14	51.39
Zm00001d046553_P003	Maize	cytosol	77.03	41.48
Solyc10g054340.1.1	Tomato	plastid	10.36	34.91

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829
InterPro:IPR013785	UniProt:K4CHR6	PFAM:PF00274	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF35
SUPFAM:SSF51569	EnsemblPlantsGene:Solyc07g065900.2	EnsemblPlants:Solyc07g065900.2.1	UniParc:UPI000276B07C	SEG:seg	:

Description

Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:K4CHR6]

Coordinates

chr7:+:67492598..67495291

Molecular Weight (calculated)

38211.6 Da

IEP (calculated)

7.377

GRAVY (calculated)

-0.162

Length

357 amino acids

Sequence
(BLAST)

001: MSAFVGKYAE ELIKNAKYIA TPGKGILAAD ESTGTIGKRL SSINVENIEP NRQALRELLF TSPNALPYLS GVILFEETLY QSTSDGKPFV ELLQENHVVP
101: GIKVDKGTVD LAGTNGETTT QGFDSLGARC AQYYKAGARF AKWRAVLKIG ATEPSELSIQ QNAQGLARYA IICQENGLVP IVEPEILTDG NHDIKKCAAA
201: TETVLAAVYK ALNDQHVLLE GTLLKPNMVT PGSDSPKVAA EVIAEYTVTA LRRTVPPAVP GIVFLSGGQS EEEATVNLNA MNKLEVLKPW TLSFSFGRAL
301: QQSTLKTWGG KKENVGKAQE AFLTRCKANS DATLGKYTGG SGSGAASESL FVKGYKY

Best Arabidopsis Sequence Match ( AT4G26530.2 )
(BLAST)

001: MSAFVGKYAD ELIKTAKYIA TPGKGILAAD ESTGTIGKRF ASINVENIES NRQALRELLF TSPGTFPCLS GVILFEETLY QKTTDGKPFV ELLMENGVIP
101: GIKVDKGVVD LAGTNGETTT QGLDSLGARC QEYYKAGARF AKWRAVLKIG ATEPSELSIQ ENAKGLARYA IICQENGLVP IVEPEVLTDG SHDIKKCAAV
201: TETVLAAVYK ALNDHHVLLE GTLLKPNMVT PGSDSPKVAP EVIAEYTVTA LRRTVPPAVP GIVFLSGGQS EEEATLNLNA MNKLDVLKPW TLTFSFGRAL
301: QQSTLKAWAG KTENVAKAQA TFLTRCKGNS DATLGKYTGG ASGDSAASES LYEEGYKY

Arabidopsis Description

FBA5Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178V385]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.