Factsheet for GSMUA_Achr3P12000_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14187	Soybean	cytosol, nucleus	87.2	82.07
Solyc07g065900.2.1	Tomato	nucleus	86.61	81.51
VIT_19s0015g01720.t01	Wine grape	cytosol	85.71	80.67
KRH73948	Soybean	cytosol, endoplasmic reticulum	85.42	80.39
PGSC0003DMT400057332	Potato	cytosol	82.44	80.29
AT4G26530.3	Thale cress	cytosol	83.93	78.77
Os06t0608700-03	Rice	cytosol	83.63	78.49
TraesCS7B01G283000.1	Wheat	cytosol	82.74	77.22
TraesCS7D01G377400.1	Wheat	cytosol, golgi	82.44	76.94
EER88632	Sorghum	cytosol	80.65	75.7
AT4G26520.3	Thale cress	cytosol	78.57	73.74
GSMUA_Achr11P...	Banana	cytosol	28.57	73.28
GSMUA_Achr8P08990_001	Banana	cytosol	72.02	72.67
GSMUA_Achr5P25490_001	Banana	cytosol	69.94	71.43
TraesCS7A01G381100.2	Wheat	endoplasmic reticulum, mitochondrion	81.85	70.51
GSMUA_Achr8P07620_001	Banana	mitochondrion, plastid	76.49	70.41
GSMUA_Achr8P01230_001	Banana	cytosol	64.88	68.77
GSMUA_Achr11P...	Banana	cytosol	38.39	66.49
GSMUA_Achr6P09510_001	Banana	cytosol	58.33	55.68
GSMUA_Achr6P17900_001	Banana	plastid	58.33	50.39
GSMUA_Achr8P17280_001	Banana	plastid	58.04	50.26
GSMUA_AchrUn_...	Banana	plastid	57.74	49.49
GSMUA_Achr5P19920_001	Banana	plasma membrane, plastid	56.25	48.34
Zm00001d046553_P003	Maize	cytosol	77.08	39.06

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
Gene3D:3.20.20.70	InterPro:Aldolase_TIM	InterPro:FBA_I	GO:GO:0003674	GO:GO:0003824	GO:GO:0004332
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G12000_001	EnsemblPlants:GSMUA_Achr3P12000_001	EnsemblPlants:GSMUA_Achr3T12000_001
InterPro:IPR013785	UniProt:M0SDW7	PFAM:PF00274	PANTHER:PTHR11627	PANTHER:PTHR11627:SF38	SUPFAM:SSF51569
UniParc:UPI000296173C	SEG:seg	:	:	:	:

Description

Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G12000_001]

Coordinates

chr3:-:8906945..8909671

Molecular Weight (calculated)

35840.0 Da

IEP (calculated)

8.856

GRAVY (calculated)

-0.104

Length

336 amino acids

Sequence
(BLAST)

001: MSAFVGKYAD ELIRTAKYIA TPGKGILAAD ESTGTIGKRL SSINVENTEP NRQALRELLF TTFDALPSIS GVILFEETLY QKTSAGKPFV DVLADNKVIP
101: GIKVDKGIVE LAGTNGETTT QGFDSLGARC LQYYKAGARF AKWRAVLKIG PTEPSELAIQ QNAQGLARYA IICQENGLVP IVEPEILTDG NHDIKKCAAG
201: TLLKPNMVTP GSDSPKVAPA VVAEYTVGAL RRTVPPAVPG IVFLSGGQSE EDATLNLNAM NKLGVLKPWT LSFSFGRALQ QSTIKKWSGK KENVPSAQAA
301: FLARCKANSE ATLGKYAGCA ADAAASESLY VKDYKY

Best Arabidopsis Sequence Match ( AT4G26530.2 )
(BLAST)

001: MSAFVGKYAD ELIKTAKYIA TPGKGILAAD ESTGTIGKRF ASINVENIES NRQALRELLF TSPGTFPCLS GVILFEETLY QKTTDGKPFV ELLMENGVIP
101: GIKVDKGVVD LAGTNGETTT QGLDSLGARC QEYYKAGARF AKWRAVLKIG ATEPSELSIQ ENAKGLARYA IICQENGLVP IVEPEVLTDG SHDIKKCAAV
201: TETVLAAVYK ALNDHHVLLE GTLLKPNMVT PGSDSPKVAP EVIAEYTVTA LRRTVPPAVP GIVFLSGGQS EEEATLNLNA MNKLDVLKPW TLTFSFGRAL
301: QQSTLKAWAG KTENVAKAQA TFLTRCKGNS DATLGKYTGG ASGDSAASES LYEEGYKY

Arabidopsis Description

FBA5Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178V385]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.