Factsheet for PGSC0003DMT400057332

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g065900.2.1	Tomato	nucleus	97.39	94.12
KRH14187	Soybean	cytosol, nucleus	91.59	88.52
VIT_19s0015g01720.t01	Wine grape	cytosol	91.01	87.96
KRH73948	Soybean	cytosol, endoplasmic reticulum	90.43	87.39
AT4G26530.3	Thale cress	cytosol	87.83	84.64
GSMUA_Achr3P12000_001	Banana	cytosol, plasma membrane	80.29	82.44
Os06t0608700-03	Rice	cytosol	83.19	80.17
TraesCS7B01G283000.1	Wheat	cytosol	82.03	78.61
TraesCS7D01G377400.1	Wheat	cytosol, golgi	81.74	78.33
EER88632	Sorghum	cytosol	80.58	77.65
AT4G26520.3	Thale cress	cytosol	80.29	77.37
PGSC0003DMT400072632	Potato	cytosol	80.0	77.09
PGSC0003DMT400006894	Potato	cytosol	79.71	76.82
TraesCS7A01G381100.2	Wheat	endoplasmic reticulum, mitochondrion	82.32	72.82
PGSC0003DMT400031351	Potato	cytosol, extracellular, plastid	58.84	51.39
PGSC0003DMT400078520	Potato	extracellular, plastid	58.84	51.39
PGSC0003DMT400009127	Potato	plastid	58.26	50.89
PGSC0003DMT400008103	Potato	cytosol, extracellular, plastid	57.97	50.38
Zm00001d046553_P003	Maize	cytosol	77.39	40.27

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:2.1.1.2
MapMan:3.1.2.2	Gene3D:3.20.20.70	ProteinID:AAQ90153	ProteinID:AAQ90153.1	EMBL:AY300041	InterPro:Aldolase_I_AS
InterPro:Aldolase_TIM	InterPro:FBA_I	GO:GO:0003674	GO:GO:0003824	GO:GO:0004332	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016829	InterPro:IPR013785	UniProt:M1C0V6	PFAM:PF00274
EnsemblPlantsGene:PGSC0003DMG400022263	PGSC:PGSC0003DMG400022263	EnsemblPlants:PGSC0003DMT400057332	ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF38
SUPFAM:SSF51569	UniParc:UPI000296C635	SEG:seg	:	:	:

Description

Fructose-bisphosphate aldolase [Source:PGSC_GENE;Acc:PGSC0003DMG400022263]

Coordinates

chr7:+:55888669..55891111

Molecular Weight (calculated)

36892.1 Da

IEP (calculated)

6.544

GRAVY (calculated)

-0.170

Length

345 amino acids

Sequence
(BLAST)

001: MKNAKYIATP GKGILAADES TGTIGKRLSS INVENIEANR QALRELLFTS PNALPYLSGV ILFEETLYQN TCDGKPFVEL LQENNVVPGI KVDKGTVELA
101: GTNGETTTQG LDSLGARCAQ YYKAGARFAK WRAVLKIGAT EPSELSIQQN AQGLARYAII CQENGLVPIV EPEILTDGNH DIKKCAAATE TVLAAVYKAL
201: NDQHVLLEGT LLKPNMVTPG SDSPKVAAEV IAEYTVTALR RTVPPAVPGI VFLSGGQSEE EATLNLNAMN KLEVLKPWTL SFSFGRALQQ STLKTWGGEK
301: ENVGKAQEAF LTRCKANSDA TLGKYTGGSG SGAASESLFV KGYKY

Best Arabidopsis Sequence Match ( AT4G26530.2 )
(BLAST)

001: MSAFVGKYAD ELIKTAKYIA TPGKGILAAD ESTGTIGKRF ASINVENIES NRQALRELLF TSPGTFPCLS GVILFEETLY QKTTDGKPFV ELLMENGVIP
101: GIKVDKGVVD LAGTNGETTT QGLDSLGARC QEYYKAGARF AKWRAVLKIG ATEPSELSIQ ENAKGLARYA IICQENGLVP IVEPEVLTDG SHDIKKCAAV
201: TETVLAAVYK ALNDHHVLLE GTLLKPNMVT PGSDSPKVAP EVIAEYTVTA LRRTVPPAVP GIVFLSGGQS EEEATLNLNA MNKLDVLKPW TLTFSFGRAL
301: QQSTLKAWAG KTENVAKAQA TFLTRCKGNS DATLGKYTGG ASGDSAASES LYEEGYKY

Arabidopsis Description

FBA5Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178V385]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.