Factsheet for PGSC0003DMT400031351

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

nucleus 1
plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g062340.2.1	Tomato	plastid	98.48	98.48
PGSC0003DMT400008103	Potato	cytosol, extracellular, plastid	91.65	91.18
PGSC0003DMT400009127	Potato	plastid	90.63	90.63
KRH29349	Soybean	plastid	88.35	87.47
KRH29352	Soybean	plastid	88.35	87.47
KRH24377	Soybean	plastid	87.85	87.19
KRH60768	Soybean	plastid	86.84	86.84
PGSC0003DMT400078520	Potato	extracellular, plastid	79.24	79.24
PGSC0003DMT400057332	Potato	cytosol	51.39	58.84
PGSC0003DMT400006894	Potato	cytosol	50.63	55.87
PGSC0003DMT400072632	Potato	cytosol	50.63	55.87

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:1.2.5
MapMan:3.12.2	Gene3D:3.20.20.70	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM	InterPro:FBA_I	GO:GO:0003674
GO:GO:0003824	GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829
InterPro:IPR013785	UniProt:M1AVJ2	PFAM:PF00274	EnsemblPlantsGene:PGSC0003DMG400012012	PGSC:PGSC0003DMG400012012	EnsemblPlants:PGSC0003DMT400031351
ScanProsite:PS00158	PANTHER:PTHR11627	PANTHER:PTHR11627:SF27	SUPFAM:SSF51569	UniParc:UPI000294E6F8	SEG:seg

Description

Fructose-bisphosphate aldolase [Source:PGSC_GENE;Acc:PGSC0003DMG400012012]

Coordinates

chr2:-:20680814..20683256

Molecular Weight (calculated)

42687.0 Da

IEP (calculated)

6.784

GRAVY (calculated)

-0.142

Length

395 amino acids

Sequence
(BLAST)

001: MASASLLKTS PVINKTDFIK GQALRQPSVS VSVVRSHPSG LTVRASSYAD ELIKTAKTVA SPGRGILAMD ESNATCGKRL DSIGLENTEA NRQAYRTLLV
101: SAPGLGNYIS GAILFEETLY QSTVDGKKIV DVLLEQNIVP GIKVDKGLVP LVGSNNESWC QGLDGLASRS AAYYQQGARF AKWRTVVSIP NGPSALAVKE
201: AAWGLARYAA ISQDNGLVPI VEPEILLDGE HNIDRTFEVA QQVWAEVFFY LAENNVMFEG ILLKPSMVTP GAECKERATP EQVADYTLKL LQRRIPPAVP
301: GIMFLSGGQS EVEATLNLNA MNQSPNPWHV SFSYARALQN TCLKTWGGRP ENVQAAQEAL LTRASANSLA QLGKYTGEGE SEEAKKGMFV KGYVY

Best Arabidopsis Sequence Match ( AT4G38970.1 )
(BLAST)

001: MASTSLLKAS PVLDKSEWVK GQSVLFRQPS SASVVLRNRA TSLTVRAASS YADELVKTAK TIASPGRGIL AMDESNATCG KRLDSIGLEN TEANRQAFRT
101: LLVSAPGLGQ YVSGAILFEE TLYQSTTEGK KMVDVLVEQN IVPGIKVDKG LVPLVGSNNE SWCQGLDGLS SRTAAYYQQG ARFAKWRTVV SIPNGPSALA
201: VKEAAWGLAR YAAISQDSGL VPIVEPEILL DGEHDIDRTY DVAEKVWAEV FFYLAQNNVM FEGILLKPSM VTPGAESKDR ATPEQVAAYT LKLLRNRVPP
301: AVPGIMFLSG GQSEVEATLN LNAMNQAPNP WHVSFSYARA LQNTCLKTWG GRPENVNAAQ TTLLARAKAN SLAQLGKYTG EGESEEAKEG MFVKGYTY

Arabidopsis Description

FBA2Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178UW98]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.