Factsheet for PGSC0003DMT400008103

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g110360.2.1	Tomato	plastid	99.75	99.75
VIT_04s0023g03010.t01	Wine grape	plastid	92.19	92.42
PGSC0003DMT400009127	Potato	plastid	91.18	91.65
PGSC0003DMT400031351	Potato	cytosol, extracellular, plastid	91.18	91.65
VIT_03s0038g00670.t01	Wine grape	plastid	90.18	89.95
GSMUA_Achr5P19920_001	Banana	plasma membrane, plastid	87.66	89.0
Os11t0171300-01	Rice	extracellular, plastid	86.15	88.14
GSMUA_Achr6P17900_001	Banana	plastid	84.89	86.63
EES09371	Sorghum	plastid	84.13	86.08
Zm00001d023559_P001	Maize	plastid	84.13	86.08
TraesCS5D01G122700.1	Wheat	plastid	83.12	85.71
TraesCS5A01G108000.1	Wheat	plastid	83.12	85.71
EES16731	Sorghum	plastid	83.88	85.6
GSMUA_Achr8P17280_001	Banana	plastid	83.63	85.57
HORVU5Hr1G032980.1	Barley	plastid	82.87	85.45
TraesCS5B01G115300.1	Wheat	golgi	82.87	85.45
TraesCS4A01G206400.1	Wheat	plastid	83.38	85.31
HORVU4Hr1G019570.1	Barley	plastid	83.12	85.05
TraesCS4B01G109900.1	Wheat	plastid	83.12	85.05
TraesCS4D01G107400.1	Wheat	plastid	83.12	85.05
Zm00001d053015_P001	Maize	plastid	83.63	84.26
PGSC0003DMT400078520	Potato	extracellular, plastid	78.09	78.48
PGSC0003DMT400057332	Potato	cytosol	50.38	57.97
PGSC0003DMT400072632	Potato	cytosol	49.62	55.03
PGSC0003DMT400006894	Potato	cytosol	49.37	54.75

Protein Annotations

KEGG:00010+4.1.2.13	KEGG:00030+4.1.2.13	KEGG:00051+4.1.2.13	KEGG:00680+4.1.2.13	KEGG:00710+4.1.2.13	MapMan:1.2.5
MapMan:3.12.2	Gene3D:3.20.20.70	ProteinID:ABY58016	ProteinID:ABY58016.1	InterPro:Aldolase_I_AS	InterPro:Aldolase_TIM
ProteinID:CAA71408	ProteinID:CAA71408.1	EMBL:EU344848	InterPro:FBA_I	GO:GO:0003674	GO:GO:0003824
GO:GO:0004332	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829	InterPro:IPR013785
UniProt:M0ZU28	PFAM:PF00274	EnsemblPlantsGene:PGSC0003DMG400003123	PGSC:PGSC0003DMG400003123	EnsemblPlants:PGSC0003DMT400008103	ScanProsite:PS00158
PANTHER:PTHR11627	PANTHER:PTHR11627:SF22	SUPFAM:SSF51569	UniParc:UPI000295048F	EMBL:Y10380	:

Description

Fructose-bisphosphate aldolase [Source:PGSC_GENE;Acc:PGSC0003DMG400003123]

Coordinates

chr1:+:86663461..86666351

Molecular Weight (calculated)

42803.1 Da

IEP (calculated)

7.336

GRAVY (calculated)

-0.132

Length

397 amino acids

Sequence
(BLAST)

001: MASASLLKSS PVLDKSEFLK GQSLRQPSVS VVRCHPTNAT SLTVRAASSY ADELIKTAKT VASPGRGILA MDESNATCGK RLASIGLENT EANRQAYRTL
101: LVSAPGLGQY ISGAILFEET LYQSTVDGRK IVDVLIEQNI VPGIKVDKGL VPLAGSNDES WCQGLDGLAS RSAAYYQQGA RFAKWRTVVS IPNGPSALAV
201: KEAAWGLARY AAISQDNGLV PIVEPEILLD GEHGIDRTFE VAQKVWAEVF FYLAENNVMF EGILLKPSMV TPGAECKDRA TPQQVADYTL NLLKRRIPPA
301: VPGIMFLSGG QSEVEATLNL NAMNQAPNPW HVSFSYARAL QNTCLKTWGG QPENVKAAQD TLLVRAKANS LAQLGKYTGE GESDEAKQGM FVKGYVY

Best Arabidopsis Sequence Match ( AT4G38970.1 )
(BLAST)

001: MASTSLLKAS PVLDKSEWVK GQSVLFRQPS SASVVLRNRA TSLTVRAASS YADELVKTAK TIASPGRGIL AMDESNATCG KRLDSIGLEN TEANRQAFRT
101: LLVSAPGLGQ YVSGAILFEE TLYQSTTEGK KMVDVLVEQN IVPGIKVDKG LVPLVGSNNE SWCQGLDGLS SRTAAYYQQG ARFAKWRTVV SIPNGPSALA
201: VKEAAWGLAR YAAISQDSGL VPIVEPEILL DGEHDIDRTY DVAEKVWAEV FFYLAQNNVM FEGILLKPSM VTPGAESKDR ATPEQVAAYT LKLLRNRVPP
301: AVPGIMFLSG GQSEVEATLN LNAMNQAPNP WHVSFSYARA LQNTCLKTWG GRPENVNAAQ TTLLARAKAN SLAQLGKYTG EGESEEAKEG MFVKGYTY

Arabidopsis Description

FBA2Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178UW98]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.